RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 CALML4Q96GE6 196 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 PNMA5Q96PV4 448 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 PCYT2Q99447 389 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 CUEDC2Q9H467 287 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 GOLPH3LQ9H4A5 285 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
TRAF4-206ENST00000454852 HMX1Q9NP08 348 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-206ENST00000454852 PAK6Q9NQU5 681 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-206ENST00000454852 LOXHD1Q8IVV2 1947 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 FRMPD3Q5JV73 1810 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 A0A087X0B3 334 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 A0A1B0GVL5 298 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 NOP56O00567 594 aaKnown RBP12.61□□□□□ -0.39
TRAF4-206ENST00000454852 CHMP2AO43633 222 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 KPNA6O60684 536 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 MMP3P08254 477 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 CAPN2P17655 700 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 TCF7P36402 384 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-206ENST00000454852 CCT6AP40227 531 aaKnown RBP12.61□□□□□ -0.39
TRAF4-206ENST00000454852 CPT1AP50416 773 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 NDUFA8P51970 172 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 SLC9C1Q4G0N8 1177 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 NAALADL2Q58DX5 795 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-206ENST00000454852 LHX8Q68G74 356 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-206ENST00000454852 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 KLHDC9Q8NEP7 349 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 ATP6V0A1Q93050 837 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 DYDC2Q96IM9 177 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 LXNQ9BS40 222 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 MAGEF1Q9HAY2 307 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 STK17AQ9UEE5 414 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 TELO2Q9Y4R8 837 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 HTTP42858 3142 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 SYNRGQ9UMZ2 1314 aa12.61□□□□□ -0.39
TRAF4-206ENST00000454852 DYNC1LI2O43237 492 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-206ENST00000454852 STBD1O95210 358 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 LIG1P18858 919 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 SYKP43405 635 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 STAT5BP51692 787 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
TRAF4-206ENST00000454852 ECM1Q16610 540 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
TRAF4-206ENST00000454852 DGKDQ16760 1214 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 SKOR2Q2VWA4 1001 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-206ENST00000454852 BRDTQ58F21 947 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-206ENST00000454852 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-206ENST00000454852 GPT2Q8TD30 523 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 SH3TC2Q8TF17 1288 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 ZNF333Q96JL9 665 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 NACC1Q96RE7 527 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 C16orf70Q9BSU1 422 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■■■■□ 24
TRAF4-206ENST00000454852 AP5M1Q9H0R1 490 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 SMARCAD1Q9H4L7 1026 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 SPC25Q9HBM1 224 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 WRAP73Q9P2S5 460 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-206ENST00000454852 SAMM50Q9Y512 469 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 PPME1Q9Y570 386 aa12.6□□□□□ -0.39
TRAF4-206ENST00000454852 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 ACTN4O43707 911 aaKnown RBP12.59□□□□□ -0.39
TRAF4-206ENST00000454852 ZNF862O60290 1169 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 ZNF202O95125 648 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 F2P00734 622 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 LGALS2P05162 132 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 PLCG1P19174 1290 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 CNGA1P29973 690 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 UGCGQ16739 394 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 RRAGBQ5VZM2 374 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 SWSAP1Q6NVH7 229 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 PDXDC2PQ6P474 469 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 BANK1Q8NDB2 785 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 LRRC15Q8TF66 581 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-206ENST00000454852 CDK5RAP3Q96JB5 506 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 FAM167AQ96KS9 214 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
TRAF4-206ENST00000454852 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 XPNPEP3Q9NQH7 507 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 ANKEF1Q9NU02 776 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 DDX19AQ9NUU7 478 aaKnown RBP12.59□□□□□ -0.39
TRAF4-206ENST00000454852 GABBR1Q9UBS5 961 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 DBR1Q9UK59 544 aaKnown RBP12.59□□□□□ -0.39
TRAF4-206ENST00000454852 KIAA1024Q9UPX6 916 aa12.59□□□□□ -0.39
TRAF4-206ENST00000454852 HAS3O00219 553 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 POLR2DO15514 142 aaKnown RBP12.58□□□□□ -0.4
TRAF4-206ENST00000454852 NR1I2O75469 434 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 EYA4O95677 639 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 MYL1P05976 194 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms