RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SYCP3Q8IZU3 236 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 CCDC42Q96M95 316 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 SLC38A10Q9HBR0 1119 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 CAPN11Q9UMQ6 739 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 TFR2Q9UP52 801 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 ZNF536O15090 1300 aa15.08■□□□□ 0.01
CLK3-203ENST00000454830 PSMD10O75832 226 aa15.08■□□□□ 0
CLK3-203ENST00000454830 NMT1P30419 496 aaKnown RBP15.08■□□□□ 0
CLK3-203ENST00000454830 CYLC1P35663 651 aaPredicted RBP15.08■□□□□ 0
CLK3-203ENST00000454830 SYTL5Q8TDW5 730 aaPredicted RBP15.08■□□□□ 0
CLK3-203ENST00000454830 NACC1Q96RE7 527 aa15.08■□□□□ 0
CLK3-203ENST00000454830 POLR3CQ9BUI4 534 aaPredicted RBP15.08■□□□□ 0
CLK3-203ENST00000454830 AKR1B10O60218 316 aa15.08■□□□□ 0
CLK3-203ENST00000454830 NDUFA10O95299 355 aa15.08■□□□□ 0
CLK3-203ENST00000454830 PTPRAP18433 802 aa15.08■□□□□ 0
CLK3-203ENST00000454830 RINT1Q6NUQ1 792 aa15.08■□□□□ 0
CLK3-203ENST00000454830 GPRC5DQ9NZD1 345 aa15.08■□□□□ 0
CLK3-203ENST00000454830 PLA2G6O60733 806 aa15.07■□□□□ 0
CLK3-203ENST00000454830 ZBED6P86452 979 aa15.07■□□□□ 0
CLK3-203ENST00000454830 CYP27A1Q02318 531 aa15.07■□□□□ 0
CLK3-203ENST00000454830 SPA17Q15506 151 aa15.07■□□□□ 0
CLK3-203ENST00000454830 ODR4Q5SWX8 454 aa15.07■□□□□ 0
CLK3-203ENST00000454830 FAM178BQ8IXR5 827 aa15.07■□□□□ 0
CLK3-203ENST00000454830 UBXN4Q92575 508 aa15.07■□□□□ 0
CLK3-203ENST00000454830 SLC5A5Q92911 643 aa15.07■□□□□ 0
CLK3-203ENST00000454830 RNF181Q9P0P0 153 aa15.07■□□□□ 0
CLK3-203ENST00000454830 PHLPP2Q6ZVD8 1323 aa15.07■□□□□ 0
CLK3-203ENST00000454830 PITPNM2Q9BZ72 1349 aa15.07■□□□□ 0
CLK3-203ENST00000454830 NCBP1Q09161 790 aaKnown RBP15.07■□□□□ 0
CLK3-203ENST00000454830 ERCC6LQ2NKX8 1250 aa15.07■□□□□ 0
CLK3-203ENST00000454830 LRRC55Q6ZSA7 311 aa15.07■□□□□ 0
CLK3-203ENST00000454830 ERO1AQ96HE7 468 aa15.07■□□□□ 0
CLK3-203ENST00000454830 LSM14BQ9BX40 385 aaKnown RBP15.07■□□□□ 0
CLK3-203ENST00000454830 LMNB1P20700 586 aa15.07■□□□□ 0
CLK3-203ENST00000454830 ZC2HC1CQ53FD0 456 aaPredicted RBP15.07■□□□□ 0
CLK3-203ENST00000454830 TEX35Q5T0J7 233 aa15.07■□□□□ 0
CLK3-203ENST00000454830 CCDC122Q5T0U0 273 aa15.07■□□□□ 0
CLK3-203ENST00000454830 TUFT1Q9NNX1 390 aa15.07■□□□□ 0
CLK3-203ENST00000454830 RIPK3Q9Y572 518 aa15.07■□□□□ 0
CLK3-203ENST00000454830 VWA5AO00534 786 aa15.06■□□□□ 0
CLK3-203ENST00000454830 MAP3K10Q02779 954 aa15.06■□□□□ 0
CLK3-203ENST00000454830 KCNA1Q09470 495 aa15.06■□□□□ 0
CLK3-203ENST00000454830 KNOP1Q1ED39 458 aaKnown RBP15.06■□□□□ 0
CLK3-203ENST00000454830 SUPT20HL1Q3ZLR7 823 aa15.06■□□□□ 0
CLK3-203ENST00000454830 CLEC4DQ8WXI8 215 aa15.06■□□□□ 0
CLK3-203ENST00000454830 PARVGQ9HBI0 331 aa15.06■□□□□ 0
CLK3-203ENST00000454830 TRIM10Q9UDY6 481 aa15.06■□□□□ 0
CLK3-203ENST00000454830 CALUO43852 315 aaPredicted RBP15.06■□□□□ 0
CLK3-203ENST00000454830 USO1O60763 962 aaKnown RBP15.06■□□□□ 0
CLK3-203ENST00000454830 NAP1L1P55209 391 aaKnown RBP15.06■□□□□ 0
CLK3-203ENST00000454830 EPHA7Q15375 998 aa15.06■□□□□ 0
CLK3-203ENST00000454830 TKFCQ3LXA3 575 aa15.06■□□□□ 0
CLK3-203ENST00000454830 UTP14CQ5TAP6 766 aaKnown RBP15.06■□□□□ 0
CLK3-203ENST00000454830 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
CLK3-203ENST00000454830 SLC35F6Q8N357 371 aa15.06■□□□□ 0
CLK3-203ENST00000454830 RDH13Q8NBN7 331 aa15.06■□□□□ 0
CLK3-203ENST00000454830 LRRN4CLQ8ND94 238 aa15.06■□□□□ 0
CLK3-203ENST00000454830 HSD17B14Q9BPX1 270 aa15.06■□□□□ 0
CLK3-203ENST00000454830 ARMCX3Q9UH62 379 aaPredicted RBP15.06■□□□□ 0
CLK3-203ENST00000454830 ABL1P00519 1130 aa15.06■□□□□ 0
CLK3-203ENST00000454830 EHHADHQ08426 723 aa15.06■□□□□ 0
CLK3-203ENST00000454830 SULF1Q8IWU6 871 aa15.06■□□□□ 0
CLK3-203ENST00000454830 IKZF4Q9H2S9 585 aa15.06■□□□□ 0
CLK3-203ENST00000454830 NHEJ1Q9H9Q4 299 aaPredicted RBP15.06■□□□□ 0
CLK3-203ENST00000454830 EPHB6O15197 1021 aa15.05■□□□□ 0
CLK3-203ENST00000454830 CYP2J2P51589 502 aa15.05■□□□□ 0
CLK3-203ENST00000454830 POLR2FP61218 127 aaKnown RBP15.05■□□□□ 0
CLK3-203ENST00000454830 RETREG2Q8NC44 543 aa15.05■□□□□ 0
CLK3-203ENST00000454830 SPON1Q9HCB6 807 aa15.05■□□□□ 0
CLK3-203ENST00000454830 MACROD2A1Z1Q3 448 aa15.05■□□□□ -0
CLK3-203ENST00000454830 PPP2R5CQ13362 524 aa15.05■□□□□ -0
CLK3-203ENST00000454830 COBLL1Q53SF7 1204 aa15.05■□□□□ -0
CLK3-203ENST00000454830 DCPSQ96C86 337 aaKnown RBP15.05■□□□□ -0
CLK3-203ENST00000454830 ERGIC2Q96RQ1 377 aa15.05■□□□□ -0
CLK3-203ENST00000454830 PUF60Q9UHX1 559 aaKnown RBP15.05■□□□□ -0
CLK3-203ENST00000454830 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
CLK3-203ENST00000454830 ZNF646O15015 1829 aaPredicted RBP15.05■□□□□ -0
CLK3-203ENST00000454830 RPL13P26373 211 aaKnown RBP15.05■□□□□ -0
CLK3-203ENST00000454830 HSD17B4P51659 736 aa15.05■□□□□ -0
CLK3-203ENST00000454830 APBA1Q02410 837 aa15.05■□□□□ -0
CLK3-203ENST00000454830 RAPGEF1Q13905 1077 aa15.05■□□□□ -0
CLK3-203ENST00000454830 HS2ST1Q7LGA3 356 aa15.05■□□□□ -0
CLK3-203ENST00000454830 FHDC1Q9C0D6 1143 aaPredicted RBP15.05■□□□□ -0
CLK3-203ENST00000454830 TMEM150BA6NC51 233 aa15.04■□□□□ -0
CLK3-203ENST00000454830 CTIFO43310 598 aaKnown RBP15.04■□□□□ -0
CLK3-203ENST00000454830 GNA14O95837 355 aa15.04■□□□□ -0
CLK3-203ENST00000454830 PLEKP08567 350 aaPredicted RBP15.04■□□□□ -0
CLK3-203ENST00000454830 KRT83P78385 493 aa15.04■□□□□ -0
CLK3-203ENST00000454830 COG2Q14746 738 aa15.04■□□□□ -0
CLK3-203ENST00000454830 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.04■□□□□ -0
CLK3-203ENST00000454830 WRAP73Q9P2S5 460 aaPredicted RBP15.04■□□□□ -0
CLK3-203ENST00000454830 CTAGE9A4FU28 777 aa15.04■□□□□ -0
CLK3-203ENST00000454830 LRRC53A6NM62 1247 aa15.04■□□□□ -0
CLK3-203ENST00000454830 SLC26A4O43511 780 aa15.04■□□□□ -0
CLK3-203ENST00000454830 EPB41P11171 864 aaKnown RBP15.04■□□□□ -0
CLK3-203ENST00000454830 WDR78Q5VTH9 848 aa15.04■□□□□ -0
CLK3-203ENST00000454830 PADI6Q6TGC4 694 aa15.04■□□□□ -0
CLK3-203ENST00000454830 NLRX1Q86UT6 975 aa15.04■□□□□ -0
CLK3-203ENST00000454830 GPC2Q8N158 579 aa15.04■□□□□ -0
CLK3-203ENST00000454830 DRC1Q96MC2 740 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms