RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 PIGSQ96S52 555 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 FGFR1OP2Q9NVK5 253 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 TTC26A0AVF1 554 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 TTLL1O95922 423 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 PRCPP42785 496 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 VSNL1P62760 191 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 MRPS25P82663 173 aaKnown RBP12.99□□□□□ -0.33
SEC16A-207ENST00000453963 ANKRD20A4Q4UJ75 823 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 ANKRD20A8PQ5CZ79 823 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 ANKRD20A2Q5SQ80 823 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 ANKRD20A1Q5TYW2 823 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 TTBK2Q6IQ55 1244 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 SPICE1Q8N0Z3 855 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 GDAP1Q8TB36 358 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 CALR3Q96L12 384 aaKnown RBP12.99□□□□□ -0.33
SEC16A-207ENST00000453963 TSPYL2Q9H2G4 693 aaPredicted RBP12.99□□□□□ -0.33
SEC16A-207ENST00000453963 SYNGAP1Q96PV0 1343 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 IPO5O00410 1097 aaKnown RBP12.99□□□□□ -0.33
SEC16A-207ENST00000453963 RPS6KA4O75676 772 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 POLE2P56282 527 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
SEC16A-207ENST00000453963 NRBP2Q9NSY0 501 aa12.99□□□□□ -0.33
SEC16A-207ENST00000453963 GPC4O75487 556 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 ZSCAN20P17040 1043 aaPredicted RBP12.98□□□□□ -0.33
SEC16A-207ENST00000453963 PIK3CAP42336 1068 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 TSC22D3Q99576 134 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 DRP2Q13474 957 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 GRAPQ13588 217 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 SPARCL1Q14515 664 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 GSPT2Q8IYD1 628 aaKnown RBP12.98□□□□□ -0.33
SEC16A-207ENST00000453963 GRAPLQ8TC17 118 aaPredicted RBP12.98□□□□□ -0.33
SEC16A-207ENST00000453963 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 EPS15L1Q9UBC2 864 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 LRRC53A6NM62 1247 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 MXI1P50539 228 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 MAGOHP61326 146 aaKnown RBP12.98□□□□□ -0.33
SEC16A-207ENST00000453963 MMS19Q96T76 1030 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 DHX36Q9H2U1 1008 aaKnown RBP12.98□□□□□ -0.33
SEC16A-207ENST00000453963 TAF1DQ9H5J8 278 aaPredicted RBP12.98□□□□□ -0.33
SEC16A-207ENST00000453963 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 UBE2TQ9NPD8 197 aaPredicted RBP12.98□□□□□ -0.33
SEC16A-207ENST00000453963 PCDHB4Q9Y5E5 795 aa12.98□□□□□ -0.33
SEC16A-207ENST00000453963 TRIM49BA6NDI0 452 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 CFAP73A6NFT4 308 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 HNRNPDLO14979 420 aaKnown RBP12.97□□□□□ -0.33
SEC16A-207ENST00000453963 MMP10P09238 476 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 TMOD1P28289 359 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 NR1H3Q13133 447 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 ZNF449Q6P9G9 518 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 TAB3Q8N5C8 712 aaPredicted RBP12.97□□□□□ -0.33
SEC16A-207ENST00000453963 PRPF31Q8WWY3 499 aaKnown RBP12.97□□□□□ -0.33
SEC16A-207ENST00000453963 SCYL1Q96KG9 808 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
SEC16A-207ENST00000453963 SNX24Q9Y343 169 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 PLEKHA8P1O95397 391 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 ESRRGP62508 458 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 MMEL1Q495T6 779 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 RFX6Q8HWS3 928 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 TBC1D10CQ8IV04 446 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.97□□□□□ -0.339e-10■■■■■ 79.8
SEC16A-207ENST00000453963 BRIP1Q9BX63 1249 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 PARVGQ9HBI0 331 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 RAD17O75943 681 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 LRRC23Q53EV4 343 aaPredicted RBP12.97□□□□□ -0.33
SEC16A-207ENST00000453963 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 LRGUKQ96M69 825 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 EDEM3Q9BZQ6 932 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 STOML1Q9UBI4 398 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 ADGRL3Q9HAR2 1447 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 MCF2LO15068 1137 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 ACSL3O95573 720 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 MUM1L1Q5H9M0 696 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 CENPUQ71F23 418 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 MED10Q9BTT4 135 aa12.97□□□□□ -0.33
SEC16A-207ENST00000453963 LPXNO60711 386 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 KRT1P04264 644 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 NPR1P16066 1061 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 CASP1P29466 404 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 DDIT3P35638 169 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 SATB1Q01826 763 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 SUPT20HL1Q3ZLR7 823 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 BEND6Q5SZJ8 279 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-207ENST00000453963 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 SUDS3Q9H7L9 328 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-207ENST00000453963 LRRIQ4A6NIV6 560 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 PFDN6O15212 129 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 TTC4O95801 387 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 KRT3P12035 628 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms