RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 THPOP40225 353 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 USP11P51784 963 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 MARCH8Q5T0T0 291 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 GALNT17Q6IS24 598 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 CNKSR3Q6P9H4 555 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 PLPPR4Q7Z2D5 763 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 RPAINQ86UA6 219 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 TBCKQ8TEA7 893 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 GLG1Q92896 1179 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 GTF3C6Q969F1 213 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 ZNF577Q9BSK1 485 aa16.55■□□□□ 0.24
HSPG2-207ENST00000453796 YBX2Q9Y2T7 364 aaKnown RBP16.55■□□□□ 0.24
HSPG2-207ENST00000453796 CHD7Q9P2D1 2997 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 RSPH10B2B2RC85 870 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 DDX39AO00148 427 aaKnown RBP16.54■□□□□ 0.24
HSPG2-207ENST00000453796 RSPH10BP0C881 870 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 FDPSP14324 419 aaKnown RBP16.54■□□□□ 0.24
HSPG2-207ENST00000453796 ATP2A2P16615 1042 aaKnown RBP16.54■□□□□ 0.24
HSPG2-207ENST00000453796 STAT5BP51692 787 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 ST3GAL1Q11201 340 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 PPFIA1Q13136 1202 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 MKRN4PQ13434 485 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-207ENST00000453796 PLCB4Q15147 1175 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 RAB30Q15771 203 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 GRIK4Q16099 956 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 PRR16Q569H4 304 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 FAM26DQ5JW98 314 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 RUFY4Q6ZNE9 571 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 CCDC60Q8IWA6 550 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-207ENST00000453796 NECAB1Q8N987 351 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 UIMC1Q96RL1 719 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 CDX2Q99626 313 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-207ENST00000453796 KIF2CQ99661 725 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 OSBPL7Q9BZF2 842 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 AZI2Q9H6S1 392 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 TBC1D22BQ9NU19 505 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 KCNJ14Q9UNX9 436 aa16.54■□□□□ 0.24
HSPG2-207ENST00000453796 CYP3A7-CYP3A51PA0A087WV96 503 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 INSRRP14616 1297 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 CYP3A7P24462 503 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 RABGGTBP53611 331 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 NSUN7Q8NE18 718 aaKnown RBP16.53■□□□□ 0.24
HSPG2-207ENST00000453796 PHOSPHO2Q8TCD6 241 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 MBOAT7Q96N66 472 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 SLC9A7Q96T83 725 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 GJB4Q9NTQ9 266 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-207ENST00000453796 TUBE1Q9UJT0 475 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
HSPG2-207ENST00000453796 RRN3P2A6NIE6 340 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 MSH4O15457 936 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 SLC26A2P50443 739 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
HSPG2-207ENST00000453796 GRIN2CQ14957 1233 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 Q4G0T1 1027 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 PLEKHG4Q58EX7 1191 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 ZNF746Q6NUN9 644 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-207ENST00000453796 NKX2-4Q9H2Z4 354 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 MSRAQ9UJ68 235 aa16.52■□□□□ 0.24
HSPG2-207ENST00000453796 ABHD14A-ACY1A0A1B0GW23 586 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 TDP2O95551 362 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 CTSHP09668 335 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 MYOGP15173 224 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 ATP4AP20648 1035 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 DEFB103AP81534 67 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 KRT76Q01546 638 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 MGAT3Q09327 533 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 NONOQ15233 471 aaKnown RBP eCLIP16.51■□□□□ 0.23
HSPG2-207ENST00000453796 TAF2Q6P1X5 1199 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 MOXD1Q6UVY6 613 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 SMAP1Q8IYB5 467 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-207ENST00000453796 DBF4BQ8NFT6 615 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 SLC5A5Q92911 643 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 ZBTB10Q96DT7 871 aa16.51■□□□□ 0.23
HSPG2-207ENST00000453796 MAFBQ9Y5Q3 323 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-207ENST00000453796 POTEB3A0JP26 581 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 PSMD10O75832 226 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 CHRNA1P02708 482 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 XBP1P17861 261 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
HSPG2-207ENST00000453796 FAM160B1Q5W0V3 765 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 SWSAP1Q6NVH7 229 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 MIS18BP1Q6P0N0 1132 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 POTEBQ6S5H4 581 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 B3GNT9Q6UX72 402 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 HERC6Q8IVU3 1022 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 TRAPPC12Q8WVT3 735 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
HSPG2-207ENST00000453796 RIT2Q99578 217 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 ZNF302Q9NR11 478 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 TRPC6Q9Y210 931 aa16.5■□□□□ 0.23
HSPG2-207ENST00000453796 IGSF9BQ9UPX0 1349 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 ZBTB42B2RXF5 422 aa16.49■□□□□ 0.23
HSPG2-207ENST00000453796 BACH1O14867 736 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms