RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 POLR3EQ9NVU0 708 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 RTEL1Q9NZ71 1219 aa9.87□□□□□ -0.83
COL28A1-205ENST00000453441 A6NJR5 290 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 FAM86B1E9PN63 330 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 GGPS1O95749 300 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 FAM86B2P0C5J1 330 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 C6orf222P0C671 652 aaPredicted RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 KCNA2P16389 499 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 SYT1P21579 422 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 UBA1P22314 1058 aaKnown RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 ARHGAP1Q07960 439 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 LRRC41Q15345 812 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 FSCN1Q16658 493 aaKnown RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 LETM2Q2VYF4 491 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 PRR16Q569H4 304 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 CELF3Q5SZQ8 465 aaKnown RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 SLFN12Q8IYM2 578 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 KLHDC9Q8NEP7 349 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 PPTC7Q8NI37 304 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 FAM20AQ96MK3 541 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 ZSCAN16Q9H4T2 348 aaPredicted RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 AGO4Q9HCK5 861 aaKnown RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 DDX25Q9UHL0 483 aaKnown RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 PHF24Q9UPV7 400 aa9.86□□□□□ -0.83
COL28A1-205ENST00000453441 DDX49Q9Y6V7 483 aaKnown RBP9.86□□□□□ -0.83
COL28A1-205ENST00000453441 CENPFP49454 3210 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 VPS37CA5D8V6 355 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 IPO5O00410 1097 aaKnown RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 LAD1O00515 517 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 NOP56O00567 594 aaKnown RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 ADAMTS3O15072 1205 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 DYNC1LI2O43237 492 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 STX6O43752 255 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 CCNT1O60563 726 aaKnown RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 PPFIA4O75335 1185 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 FARP2O94887 1054 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 ARIH2O95376 493 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 BMP15O95972 392 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 MYCP01106 439 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 HOXD8P13378 290 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 KRT76Q01546 638 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 DGKDQ16760 1214 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 LY6KQ17RY6 165 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 GNASQ5JWF2 1037 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 MCTP1Q6DN14 999 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 NECAB2Q7Z6G3 386 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 SMAP1Q8IYB5 467 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 RDM1Q8NG50 284 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 LENG9Q96B70 501 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 ZNF577Q9BSK1 485 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 KATNAL1Q9BW62 490 aa9.85□□□□□ -0.83
COL28A1-205ENST00000453441 JPH1Q9HDC5 661 aaPredicted RBP9.85□□□□□ -0.83
COL28A1-205ENST00000453441 ELP1O95163 1332 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 ADCY6O43306 1168 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 NEMFO60524 1076 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 DTNBO60941 627 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 TDP2O95551 362 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 PGK1P00558 417 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 MMP3P08254 477 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 SFNP31947 248 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 TTC38Q5R3I4 469 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 CCSAPQ6IQ19 270 aaPredicted RBP9.84□□□□□ -0.83
COL28A1-205ENST00000453441 ZNF746Q6NUN9 644 aaPredicted RBP9.84□□□□□ -0.83
COL28A1-205ENST00000453441 SLC5A5Q92911 643 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 TNPO1Q92973 898 aaKnown RBP9.84□□□□□ -0.83
COL28A1-205ENST00000453441 GLT1D1Q96MS3 346 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 SPATA33Q96N06 139 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 MTG1Q9BT17 334 aaPredicted RBP9.84□□□□□ -0.83
COL28A1-205ENST00000453441 TEKT3Q9BXF9 490 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 PRKD2Q9BZL6 878 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 KCNMB3Q9NPA1 279 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 SLC9A2Q9UBY0 812 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 CEP131Q9UPN4 1083 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 MTMR6Q9Y217 621 aa9.84□□□□□ -0.83
COL28A1-205ENST00000453441 KIF28PB7ZC32 967 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 CTAGE5O15320 804 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 MSH4O15457 936 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 EDIL3O43854 480 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 MARCH6O60337 910 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 GAS7O60861 476 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 ARP10275 920 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 COL6A1P12109 1028 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 SLC26A2P50443 739 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 JAK3P52333 1124 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 ACLYP53396 1101 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 SP2Q02086 613 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 CALCRLQ16602 461 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 EARS2Q5JPH6 523 aaKnown RBP9.83□□□□□ -0.84
COL28A1-205ENST00000453441 GJC2Q5T442 439 aaPredicted RBP9.83□□□□□ -0.84
COL28A1-205ENST00000453441 C1orf53Q5VUE5 145 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 LRCH2Q5VUJ6 765 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 ANO1Q5XXA6 986 aa9.83□□□□□ -0.84
COL28A1-205ENST00000453441 RNF19BQ6ZMZ0 732 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms