RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 ZNF302Q9NR11 478 aa17.64■□□□□ 0.41
RBM39-219ENST00000453310 ERAP1Q9NZ08 941 aa17.64■□□□□ 0.41
RBM39-219ENST00000453310 GABBR1Q9UBS5 961 aa17.64■□□□□ 0.41
RBM39-219ENST00000453310 IGSF9BQ9UPX0 1349 aa17.64■□□□□ 0.41
RBM39-219ENST00000453310 ALPK3Q96L96 1907 aa17.64■□□□□ 0.41
RBM39-219ENST00000453310 MYH9P35579 1960 aaKnown RBP17.63■□□□□ 0.41
RBM39-219ENST00000453310 POTEMA6NI47 508 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 RGS19P49795 217 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 FXR2P51116 673 aaKnown RBP eCLIP17.63■□□□□ 0.41
RBM39-219ENST00000453310 RTP1P59025 263 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 NUCB2P80303 420 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 FOXD4L6Q3SYB3 417 aaPredicted RBP17.63■□□□□ 0.41
RBM39-219ENST00000453310 TRIM60Q495X7 471 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 FAM47CQ5HY64 1035 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 PDXDC2PQ6P474 469 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 NFRKBQ6P4R8 1299 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 FOXD4L3Q6VB84 417 aaPredicted RBP17.63■□□□□ 0.41
RBM39-219ENST00000453310 ZNF396Q96N95 335 aaPredicted RBP17.63■□□□□ 0.41
RBM39-219ENST00000453310 HTATIP2Q9BUP3 242 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 SEZ6LQ9BYH1 1024 aa17.63■□□□□ 0.41
RBM39-219ENST00000453310 SLC26A2P50443 739 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 CDK7P50613 346 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 CEBPZQ03701 1054 aaKnown RBP17.62■□□□□ 0.41
RBM39-219ENST00000453310 PTPAQ15257 358 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 EPHA7Q15375 998 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 UGCGQ16739 394 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 ARL6IP4Q66PJ3 421 aaKnown RBP17.62■□□□□ 0.41
RBM39-219ENST00000453310 DTHD1Q6ZMT9 781 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 C7orf31Q8N865 590 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 RNPEPQ9H4A4 650 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 MAFBQ9Y5Q3 323 aaPredicted RBP17.62■□□□□ 0.41
RBM39-219ENST00000453310 MROH7Q68CQ1 1323 aa17.62■□□□□ 0.41
RBM39-219ENST00000453310 PQBP1O60828 265 aaKnown RBP17.61■□□□□ 0.41
RBM39-219ENST00000453310 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
RBM39-219ENST00000453310 IL17AQ16552 155 aa17.61■□□□□ 0.41
RBM39-219ENST00000453310 SESTD1Q86VW0 696 aa17.61■□□□□ 0.41
RBM39-219ENST00000453310 BANK1Q8NDB2 785 aa17.61■□□□□ 0.41
RBM39-219ENST00000453310 ATP6V0A1Q93050 837 aa17.61■□□□□ 0.41
RBM39-219ENST00000453310 RAB34Q9BZG1 259 aa17.61■□□□□ 0.41
RBM39-219ENST00000453310 HDAC6Q9UBN7 1215 aa17.61■□□□□ 0.41
RBM39-219ENST00000453310 ATP11BQ9Y2G3 1177 aa17.61■□□□□ 0.41
RBM39-219ENST00000453310 ZNF862O60290 1169 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 P4HBP07237 508 aaKnown RBP17.6■□□□□ 0.41
RBM39-219ENST00000453310 SMIM10L2AP0DMW4 78 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 SMIM10L2BP0DMW5 78 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 ATP4AP20648 1035 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 NASPP49321 788 aaPredicted RBP17.6■□□□□ 0.41
RBM39-219ENST00000453310 PRKCEQ02156 737 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 PLCB4Q15147 1175 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 ATL3Q6DD88 541 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 ANKRD33Q7Z3H0 272 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 FAM126BQ8IXS8 530 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 CKAP2LQ8IYA6 745 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 IGSF22Q8N9C0 903 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 NEK9Q8TD19 979 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 ATP8B4Q8TF62 1192 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 DYDC2Q96IM9 177 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 EIF2AK1Q9BQI3 630 aaKnown RBP17.6■□□□□ 0.41
RBM39-219ENST00000453310 RGL1Q9NZL6 768 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
RBM39-219ENST00000453310 GTF2IRD1Q9UHL9 959 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
RBM39-219ENST00000453310 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 ATP6V1DQ9Y5K8 247 aa17.6■□□□□ 0.41
RBM39-219ENST00000453310 POTEB3A0JP26 581 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 VWA3AA6NCI4 1184 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 QARSP47897 775 aaKnown RBP17.59■□□□□ 0.41
RBM39-219ENST00000453310 PSMC5P62195 406 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 CYP4A11Q02928 519 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 TLE2Q04725 743 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 DNM1Q05193 864 aaKnown RBP17.59■□□□□ 0.41
RBM39-219ENST00000453310 PPFIA1Q13136 1202 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 PDIA5Q14554 519 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 STK38Q15208 465 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 GDF6Q6KF10 455 aaPredicted RBP17.59■□□□□ 0.41
RBM39-219ENST00000453310 POTEBQ6S5H4 581 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 FAM167AQ96KS9 214 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 TOX2Q96NM4 488 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 IPO9Q96P70 1041 aaKnown RBP17.59■□□□□ 0.41
RBM39-219ENST00000453310 LXNQ9BS40 222 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 LRWD1Q9UFC0 647 aa17.59■□□□□ 0.41
RBM39-219ENST00000453310 MORC2Q9Y6X9 1032 aaPredicted RBP17.59■□□□□ 0.41
RBM39-219ENST00000453310 TLR3O15455 904 aaKnown RBP17.58■□□□□ 0.4
RBM39-219ENST00000453310 HBP1O60381 514 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 B4GALT4O60513 344 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 DKC1O60832 514 aaKnown RBP eCLIP17.58■□□□□ 0.4
RBM39-219ENST00000453310 YEATS4O95619 227 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 OATP04181 439 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 MARCKSP29966 332 aaPredicted RBP17.58■□□□□ 0.4
RBM39-219ENST00000453310 HOXC8P31273 242 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 CTTNQ14247 550 aaKnown RBP17.58■□□□□ 0.4
RBM39-219ENST00000453310 SLC39A14Q15043 492 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 TRMT1LQ7Z2T5 733 aaKnown RBP17.58■□□□□ 0.4
RBM39-219ENST00000453310 LINC00301Q8NCQ3 95 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 ERMNQ8TAM6 284 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.4
RBM39-219ENST00000453310 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
RBM39-219ENST00000453310 HSD17B14Q9BPX1 270 aa17.58■□□□□ 0.4
RBM39-219ENST00000453310 TRPV6Q9H1D0 765 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms