RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 RILPL1Q5EBL4 403 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 B3GNT9Q6UX72 402 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 CYFIP1Q7L576 1253 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 SENP7Q9BQF6 1050 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 CDH23Q9H251 3354 aa17.71■□□□□ 0.43
VCX3B-204ENST00000453306 IPO5O00410 1097 aaKnown RBP17.7■□□□□ 0.42
VCX3B-204ENST00000453306 B4GALT4O60513 344 aa17.7■□□□□ 0.42
VCX3B-204ENST00000453306 HSDL1Q3SXM5 330 aa17.7■□□□□ 0.42
VCX3B-204ENST00000453306 ZNF577Q9BSK1 485 aa17.7■□□□□ 0.42
VCX3B-204ENST00000453306 VAV3Q9UKW4 847 aa17.7■□□□□ 0.42
VCX3B-204ENST00000453306 NOL7Q9UMY1 257 aaKnown RBP17.7■□□□□ 0.42
VCX3B-204ENST00000453306 MYH7BA7E2Y1 1941 aa17.7■□□□□ 0.42
VCX3B-204ENST00000453306 GRXCR1A8MXD5 290 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
VCX3B-204ENST00000453306 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
VCX3B-204ENST00000453306 PBX2P40425 430 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 CCL23P55773 120 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 DNM1Q05193 864 aaKnown RBP17.69■□□□□ 0.42
VCX3B-204ENST00000453306 SPIRE1Q08AE8 756 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 PTGDRQ13258 359 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 SF3A1Q15459 793 aaKnown RBP17.69■□□□□ 0.42
VCX3B-204ENST00000453306 KCNV1Q6PIU1 500 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 AFG1LQ8WV93 481 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 NOC4LQ9BVI4 516 aaKnown RBP17.69■□□□□ 0.42
VCX3B-204ENST00000453306 TRPV6Q9H1D0 765 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
VCX3B-204ENST00000453306 GSTTP1A0A1W2PQM5 241 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 DDX39AO00148 427 aaKnown RBP17.68■□□□□ 0.42
VCX3B-204ENST00000453306 EML1O00423 815 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 NEMFO60524 1076 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 KPNA6O60684 536 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 GH1P01241 217 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 PFKMP08237 780 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 PSMC6P62333 389 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 NUCB2P80303 420 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
VCX3B-204ENST00000453306 CEBPZQ03701 1054 aaKnown RBP17.68■□□□□ 0.42
VCX3B-204ENST00000453306 GRIN1Q05586 938 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 TJAP1Q5JTD0 557 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 OTOP2Q7RTS6 562 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 DHX37Q8IY37 1157 aaKnown RBP17.68■□□□□ 0.42
VCX3B-204ENST00000453306 OR6J1Q8NGC5 347 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 EMID1Q96A84 441 aaPredicted RBP17.68■□□□□ 0.42
VCX3B-204ENST00000453306 CDHR1Q96JP9 859 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 PCYT2Q99447 389 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 UNC45AQ9H3U1 944 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 CIZ1Q9ULV3 898 aaPredicted RBP17.68■□□□□ 0.42
VCX3B-204ENST00000453306 NFASCO94856 1347 aa17.68■□□□□ 0.42
VCX3B-204ENST00000453306 TBX3O15119 743 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 ATP2C1P98194 919 aaPredicted RBP17.67■□□□□ 0.42
VCX3B-204ENST00000453306 SP4Q02446 784 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 NEDD9Q14511 834 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 CALCRLQ16602 461 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 FAM20AQ96MK3 541 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 RIT2Q99578 217 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 GPR20Q99678 358 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 NAP1L4Q99733 375 aaKnown RBP17.67■□□□□ 0.42
VCX3B-204ENST00000453306 MTG1Q9BT17 334 aaPredicted RBP17.67■□□□□ 0.42
VCX3B-204ENST00000453306 PRDM12Q9H4Q4 367 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 SLC4A7Q9Y6M7 1214 aa17.67■□□□□ 0.42
VCX3B-204ENST00000453306 A6NJR5 290 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 ATG7O95352 703 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 MYL3P08590 195 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 OR52Z1P0C646 297 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 HOXD8P13378 290 aaPredicted RBP17.66■□□□□ 0.42
VCX3B-204ENST00000453306 TXKP42681 527 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 NASPP49321 788 aaPredicted RBP17.66■□□□□ 0.42
VCX3B-204ENST00000453306 PURAQ00577 322 aaKnown RBP17.66■□□□□ 0.42
VCX3B-204ENST00000453306 LAMC2Q13753 1193 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 LRCH2Q5VUJ6 765 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 SPATA33Q96N06 139 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 MLXIPQ9HAP2 919 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 CHMP5Q9NZZ3 219 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 CXXC1Q9P0U4 656 aaPredicted RBP17.66■□□□□ 0.42
VCX3B-204ENST00000453306 UMODL1Q5DID0 1318 aa17.66■□□□□ 0.42
VCX3B-204ENST00000453306 ZBBXA8MT70 800 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 ACTR2P61160 394 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 ORC2Q13416 577 aaPredicted RBP17.65■□□□□ 0.42
VCX3B-204ENST00000453306 USP38Q8NB14 1042 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 LINC00301Q8NCQ3 95 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 ATXN2LQ8WWM7 1075 aaKnown RBP17.65■□□□□ 0.42
VCX3B-204ENST00000453306 WNT8AQ9H1J5 351 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 NKX2-4Q9H2Z4 354 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 JPH1Q9HDC5 661 aaPredicted RBP17.65■□□□□ 0.42
VCX3B-204ENST00000453306 TBC1D22BQ9NU19 505 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 SLC9A2Q9UBY0 812 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 TTC28Q96AY4 2481 aa17.65■□□□□ 0.42
VCX3B-204ENST00000453306 PRUNE2Q8WUY3 3088 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 GAS7O60861 476 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 MMP3P08254 477 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 ACTN1P12814 892 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 IGFBP4P22692 258 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
VCX3B-204ENST00000453306 RFC2P35250 354 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 SLC39A14Q15043 492 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 FAM47CQ5HY64 1035 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 NFRKBQ6P4R8 1299 aa17.64■□□□□ 0.41
VCX3B-204ENST00000453306 ABHD15Q6UXT9 468 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms