RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 GSTA4O15217 222 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 ASLP04424 464 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 PYGMP11217 842 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 ZNF28P17035 718 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 MAGEA10P43363 369 aaPredicted RBP5.77□□□□□ -1.49
USP40-209ENST00000452724 DNM2P50570 870 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 ST5P78524 1137 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 ADAM9Q13443 819 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 ZNF460Q14592 562 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 ZXDCQ2QGD7 858 aaPredicted RBP5.77□□□□□ -1.49
USP40-209ENST00000452724 HABP4Q5JVS0 413 aaKnown RBP5.77□□□□□ -1.49
USP40-209ENST00000452724 ABHD17CQ6PCB6 329 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 C16orf59Q7L2K0 433 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 TTLL11Q8NHH1 800 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 MFSD3Q96ES6 412 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 TMEM168Q9H0V1 697 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 CATSPERZQ9NTU4 200 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 ASH2LQ9UBL3 628 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 FTSJ1Q9UET6 329 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 CROTQ9UKG9 612 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 INVSQ9Y283 1065 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 COQ6Q9Y2Z9 468 aa5.77□□□□□ -1.49
USP40-209ENST00000452724 NKRFO15226 690 aaKnown RBP eCLIP5.76□□□□□ -1.49
USP40-209ENST00000452724 CKMP06732 381 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 KCNA6P17658 529 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 TM4SF20Q53R12 229 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 ZCCHC8Q6NZY4 707 aaKnown RBP5.76□□□□□ -1.49
USP40-209ENST00000452724 GLB1LQ6UWU2 654 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 TTC9BQ8N6N2 239 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 IGSF22Q8N9C0 903 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 LOXL4Q96JB6 756 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 ZSWIM3Q96MP5 696 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 SAMD11Q96NU1 681 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 CELF4Q9BZC1 486 aaKnown RBP5.76□□□□□ -1.49
USP40-209ENST00000452724 HSPBP1Q9NZL4 362 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 CBLCQ9ULV8 474 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 JAG2Q9Y219 1238 aa5.76□□□□□ -1.49
USP40-209ENST00000452724 LOC105371045A0A1W2PR82 267 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 NPTXRO95502 500 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 LRG1P02750 347 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 PDE6AP16499 860 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 IL13P35225 146 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 FLT3P36888 993 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 GPR19Q15760 415 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 CRY1Q16526 586 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 TBC1D10BQ4KMP7 808 aaPredicted RBP5.75□□□□□ -1.49
USP40-209ENST00000452724 VASNQ6EMK4 673 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 DDX53Q86TM3 631 aaKnown RBP5.75□□□□□ -1.49
USP40-209ENST00000452724 LRRTM3Q86VH5 581 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 CISD2Q8N5K1 135 aaKnown RBP5.75□□□□□ -1.49
USP40-209ENST00000452724 CHST13Q8NET6 341 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 UHMK1Q8TAS1 419 aaKnown RBP5.75□□□□□ -1.49
USP40-209ENST00000452724 YTHDC1Q96MU7 727 aaKnown RBP5.75□□□□□ -1.49
USP40-209ENST00000452724 SAMD15Q9P1V8 674 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 DSEQ9UL01 958 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 MYRFQ9Y2G1 1151 aa5.75□□□□□ -1.49
USP40-209ENST00000452724 ZNF561-AS1K7EIQ3 104 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 SLC27A2O14975 620 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 LAMTOR5O43504 91 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 JMJD7P0C870 316 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 KRT15P19012 456 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 TMEM177Q53S58 311 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 CNNM4Q6P4Q7 775 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 TRMT10BQ6PF06 316 aaKnown RBP5.74□□□□□ -1.49
USP40-209ENST00000452724 TMC5Q6UXY8 1006 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 ARHGAP36Q6ZRI8 547 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 UBE2R2Q712K3 238 aaPredicted RBP5.74□□□□□ -1.49
USP40-209ENST00000452724 OSTM1Q86WC4 334 aa5.74□□□□□ -1.49
USP40-209ENST00000452724 RBM15Q96T37 977 aaKnown RBP eCLIP5.74□□□□□ -1.49
USP40-209ENST00000452724 BARX1Q9HBU1 254 aaPredicted RBP5.74□□□□□ -1.49
USP40-209ENST00000452724 TCRBV5S4A2TA0A5A2 114 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 GLRX3O76003 335 aaKnown RBP5.73□□□□□ -1.49
USP40-209ENST00000452724 AMY2AP04746 511 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 MYCLP1P12525 358 aaPredicted RBP5.73□□□□□ -1.49
USP40-209ENST00000452724 AMY2BP19961 511 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 JAM2P57087 298 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 KRTAP10-2P60368 255 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 ADAM17P78536 824 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 LACTBP83111 547 aaPredicted RBP5.73□□□□□ -1.49
USP40-209ENST00000452724 CFAP100Q494V2 611 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 PIK3R6Q5UE93 754 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 OVCH1Q7RTY7 1134 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 GGNQ86UU5 652 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 PTRH1Q86Y79 214 aaKnown RBP5.73□□□□□ -1.49
USP40-209ENST00000452724 TARS2Q9BW92 718 aaKnown RBP5.73□□□□□ -1.49
USP40-209ENST00000452724 CD244Q9BZW8 370 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 DLL4Q9NR61 685 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 SRPK3Q9UPE1 567 aa5.73□□□□□ -1.49
USP40-209ENST00000452724 SHROOM4Q9ULL8 1493 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 A0A087X0B3 334 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 FAM83GA6ND36 823 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 M0R2C6 588 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 MAN2B1O00754 1011 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 KPNA6O60684 536 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 FBXO21O94952 628 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 INSRRP14616 1297 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 POU3F2P20265 443 aaPredicted RBP5.72□□□□□ -1.49
USP40-209ENST00000452724 NEK4P51957 841 aa5.72□□□□□ -1.49
USP40-209ENST00000452724 MLLT6P55198 1093 aaPredicted RBP5.72□□□□□ -1.49
USP40-209ENST00000452724 TUSC3Q13454 348 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms