RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 PPP6R2O75170 966 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 ZNF286BP0CG31 522 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 COL6A1P12109 1028 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 SLC26A2P50443 739 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 STAT5BP51692 787 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 SOX10P56693 466 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 IL17AQ16552 155 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 FAM160B1Q5W0V3 765 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 TRIM50Q86XT4 487 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 NEK9Q8TD19 979 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 KAT2BQ92831 832 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 GLG1Q92896 1179 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 TUT1Q9H6E5 874 aaKnown RBP13.37□□□□□ -0.27
LINC00339-205ENST00000452322 ZNF302Q9NR11 478 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 ERAP1Q9NZ08 941 aa13.37□□□□□ -0.27
LINC00339-205ENST00000452322 MAFBQ9Y5Q3 323 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-205ENST00000452322 HAS3O00219 553 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 SPTLC2O15270 562 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
LINC00339-205ENST00000452322 MARCKSP29966 332 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-205ENST00000452322 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 NECAB2Q7Z6G3 386 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 UBE2Q1Q7Z7E8 422 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 KCNG4Q8TDN1 519 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 DIS3LQ8TF46 1054 aaKnown RBP13.36□□□□□ -0.27
LINC00339-205ENST00000452322 ATP6V0A1Q93050 837 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 PAWRQ96IZ0 340 aaKnown RBP13.36□□□□□ -0.27
LINC00339-205ENST00000452322 AK8Q96MA6 479 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 C11orf49Q9H6J7 331 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 STARD7Q9NQZ5 370 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 GABBR1Q9UBS5 961 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 LRWD1Q9UFC0 647 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-205ENST00000452322 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
LINC00339-205ENST00000452322 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
LINC00339-205ENST00000452322 DKC1O60832 514 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC00339-205ENST00000452322 P4HBP07237 508 aaKnown RBP13.35□□□□□ -0.27
LINC00339-205ENST00000452322 LONP1P36776 959 aaKnown RBP13.35□□□□□ -0.27
LINC00339-205ENST00000452322 PSEN2P49810 448 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 MFSD10Q14728 455 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 KIAA0753Q2KHM9 967 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 KRI1Q8N9T8 703 aaKnown RBP13.35□□□□□ -0.27
LINC00339-205ENST00000452322 CHAMP1Q96JM3 812 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 HSD17B14Q9BPX1 270 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
LINC00339-205ENST00000452322 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 SENP6Q9GZR1 1112 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-205ENST00000452322 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
LINC00339-205ENST00000452322 RCOR1Q9UKL0 485 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 WDR81Q562E7 1941 aa13.35□□□□□ -0.27
LINC00339-205ENST00000452322 A0A0U1RQG5 324 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-205ENST00000452322 QARSP47897 775 aaKnown RBP13.34□□□□□ -0.27
LINC00339-205ENST00000452322 PSMC5P62195 406 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 PSMC6P62333 389 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 GRIN1Q05586 938 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 ITGA7Q13683 1181 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 UGCGQ16739 394 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-205ENST00000452322 TNPO1Q92973 898 aaKnown RBP13.34□□□□□ -0.27
LINC00339-205ENST00000452322 VTI1AQ96AJ9 217 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 DYDC2Q96IM9 177 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 LXNQ9BS40 222 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 POLR3CQ9BUI4 534 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-205ENST00000452322 TUFT1Q9NNX1 390 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 MYH9P35579 1960 aaKnown RBP13.34□□□□□ -0.27
LINC00339-205ENST00000452322 TCHHQ07283 1943 aa13.34□□□□□ -0.27
LINC00339-205ENST00000452322 ZNF862O60290 1169 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 SLITRK3O94933 977 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 LYPLA2O95372 231 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 ATP4AP20648 1035 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 MUTP22033 750 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 KCNA4P22459 653 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 MARK3P27448 753 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 RPA1P27694 616 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 PRKCEQ02156 737 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 CYP4A11Q02928 519 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 PLCB4Q15147 1175 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 NBPF20Q3BBV1 942 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 KRT79Q5XKE5 535 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 NFRKBQ6P4R8 1299 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 SESTD1Q86VW0 696 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 C4orf19Q8IY42 314 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 SLC43A3Q8NBI5 491 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 SNX29Q8TEQ0 813 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 ATP8B4Q8TF62 1192 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 FAM167AQ96KS9 214 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 CSRNP2Q9H175 543 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 ZSWIM4Q9H7M6 989 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 RGL1Q9NZL6 768 aa13.33□□□□□ -0.27
LINC00339-205ENST00000452322 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
LINC00339-205ENST00000452322 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
LINC00339-205ENST00000452322 PP2D1A8MPX8 630 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms