RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TNS4Q8IZW8 715 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 NOC3LQ8WTT2 800 aaKnown RBP11.93□□□□□ -0.5
PKP4-206ENST00000452162 LARP4BQ92615 738 aaKnown RBP11.93□□□□□ -0.5
PKP4-206ENST00000452162 CDK5RAP3Q96JB5 506 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 VPS16Q9H269 839 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 MROH8Q9H579 483 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 HOMER2Q9NSB8 354 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 KIAA0100Q14667 2235 aaKnown RBP11.93□□□□□ -0.5
PKP4-206ENST00000452162 PVALEFA0A1B0GWK0 134 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 ZSCAN12O43309 604 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 FCER1AP12319 257 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 PPP1R2P41236 205 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 HYIQ5T013 277 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 MCTP2Q6DN12 878 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 TRIM65Q6PJ69 517 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 MOXD1Q6UVY6 613 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 KCNK18Q7Z418 384 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 FBXO11Q86XK2 927 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 KIAA0895Q8NCT3 520 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 RAET1EQ8TD07 263 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 USP6NLQ92738 828 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 P2RX5Q93086 422 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
PKP4-206ENST00000452162 RRP9O43818 475 aaKnown RBP11.92□□□□□ -0.5
PKP4-206ENST00000452162 ICAM1P05362 532 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 ALAS1P13196 640 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 CYP2B6P20813 491 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 PRMT2P55345 433 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 ETF1P62495 437 aaKnown RBP11.92□□□□□ -0.5
PKP4-206ENST00000452162 GRB14Q14449 540 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 SYCP1Q15431 976 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 ECM1Q16610 540 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 SYT10Q6XYQ8 523 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 TOGARAM2Q6ZUX3 1019 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 UNC13DQ70J99 1090 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 GJA10Q969M2 543 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 CCDC51Q96ER9 411 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 NAA15Q9BXJ9 866 aaKnown RBP11.92□□□□□ -0.5
PKP4-206ENST00000452162 SRRTQ9BXP5 876 aaKnown RBP11.92□□□□□ -0.5
PKP4-206ENST00000452162 CCPG1Q9ULG6 757 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 SLC15A5A6NIM6 579 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 LGALS16A8MUM7 142 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 CASP14P31944 242 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
PKP4-206ENST00000452162 CNGA4Q8IV77 575 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.53e-6■■□□□ 12.2
PKP4-206ENST00000452162 ZNF236Q9UL36 1845 aa11.92□□□□□ -0.5
PKP4-206ENST00000452162 BICDL2A1A5D9 508 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 OPLAHO14841 1288 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 SLC26A4O43511 780 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 STRNO43815 780 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 ELNP15502 786 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 ADORA2AP29274 412 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 ARHGAP4P98171 946 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 EHHADHQ08426 723 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 TRIM14Q14142 442 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 ANKRD40Q6AI12 368 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 ZNF507Q8TCN5 953 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 SH3TC2Q8TF17 1288 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 CPLX3Q8WVH0 158 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 SOCS4Q8WXH5 440 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 ANKRD7Q92527 254 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 HPS3Q969F9 1004 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 TRERF1Q96PN7 1200 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 RNF146Q9NTX7 359 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 PHLPP2Q6ZVD8 1323 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 MCM3APO60318 1980 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 KDM3AQ9Y4C1 1321 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 GOLGA6L9A6NEM1 432 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 COPB2P35606 906 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 IRF5Q13568 498 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 MTF1Q14872 753 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 USH1GQ495M9 461 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 MUM1L1Q5H9M0 696 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 RAD9BQ6WBX8 426 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 CSGALNACT2Q8N6G5 542 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 MMP19Q99542 508 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 LRRC27Q9C0I9 530 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 L2HGDHQ9H9P8 463 aa11.91□□□□□ -0.5
PKP4-206ENST00000452162 LCTP09848 1927 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 A0A1W2PQC6 194 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 RNF225M0QZC1 329 aaPredicted RBP11.9□□□□□ -0.5
PKP4-206ENST00000452162 ADCY3O60266 1144 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 MARCH6O60337 910 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 FOSP01100 380 aaPredicted RBP11.9□□□□□ -0.5
PKP4-206ENST00000452162 PGK2P07205 417 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 SREBF1P36956 1147 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 UBXN1Q04323 297 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 NCBP1Q09161 790 aaKnown RBP11.9□□□□□ -0.5
PKP4-206ENST00000452162 CCL14Q16627 93 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 SLC9C1Q4G0N8 1177 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 Q4G0T1 1027 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 CENPPQ6IPU0 288 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 CHST13Q8NET6 341 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms