RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS8-211ENST00000452140 RBPJLQ9UBG7 517 aa5.49□□□□□ -1.53
VPS8-211ENST00000452140 NUB1Q9Y5A7 615 aa5.49□□□□□ -1.53
VPS8-211ENST00000452140 PHLDB1Q86UU1 1377 aa5.49□□□□□ -1.53
VPS8-211ENST00000452140 PRKD3O94806 890 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 MMEP08473 750 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 PDGFRBP09619 1106 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 MC3RP41968 323 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 OCRLQ01968 901 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 MTMR1Q13613 665 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 SLC9A5Q14940 896 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 DDB1Q16531 1140 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 PLEKHG6Q3KR16 790 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 PAN2Q504Q3 1202 aaKnown RBP5.48□□□□□ -1.53
VPS8-211ENST00000452140 BROXQ5VW32 411 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 IQSEC1Q6DN90 963 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
VPS8-211ENST00000452140 FAM26EQ8N5C1 309 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 CLRN3Q8NCR9 226 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 ERCC4Q92889 916 aaPredicted RBP5.48□□□□□ -1.53
VPS8-211ENST00000452140 SMAD5Q99717 465 aaKnown RBP5.48□□□□□ -1.53
VPS8-211ENST00000452140 SYT3Q9BQG1 590 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 ZNF552Q9H707 407 aaPredicted RBP5.48□□□□□ -1.53
VPS8-211ENST00000452140 SPO11Q9Y5K1 396 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 WASHC2CQ9Y4E1 1318 aa5.48□□□□□ -1.53
VPS8-211ENST00000452140 ALG1L2C9J202 215 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 ASGR2P07307 311 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 TMEM253P0C7T8 217 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 FAHP16930 419 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 GJA4P35212 333 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 SRSF3P84103 164 aaKnown RBP5.47□□□□□ -1.53
VPS8-211ENST00000452140 ITKQ08881 620 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 TMEM62Q0P6H9 643 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 CATSPEREQ5SY80 951 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 ETV3LQ6ZN32 361 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 AMIGO3Q86WK7 504 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 FAM126BQ8IXS8 530 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 CNTD1Q8N815 330 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 SLC5A5Q92911 643 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 ZMAT4Q9H898 229 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 DTLQ9NZJ0 730 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 KLHL42Q9P2K6 505 aa5.47□□□□□ -1.53
VPS8-211ENST00000452140 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.47□□□□□ -1.53
VPS8-211ENST00000452140 MYOCOSA0A1B0GUC4 107 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 ABLIM1O14639 778 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 FOXP2O15409 715 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 LRG1P02750 347 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 HMGB1P09429 215 aaKnown RBP5.46□□□□□ -1.54
VPS8-211ENST00000452140 MC4RP32245 332 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 THBS2P35442 1172 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 SMAD3P84022 425 aaKnown RBP5.46□□□□□ -1.54
VPS8-211ENST00000452140 TERF2Q15554 542 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 SMAD2Q15796 467 aaKnown RBP5.46□□□□□ -1.54
VPS8-211ENST00000452140 MLANAQ16655 118 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 CC2D1AQ6P1N0 951 aaPredicted RBP5.46□□□□□ -1.54
VPS8-211ENST00000452140 TEPPQ6URK8 271 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 TMC5Q6UXY8 1006 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 CD300LDQ6UXZ3 194 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 NECAB2Q7Z6G3 386 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 MIB1Q86YT6 1006 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 PASD1Q8IV76 773 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 TTLL11Q8NHH1 800 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 ASB15Q8WXK1 588 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 RTF1Q92541 710 aaKnown RBP5.46□□□□□ -1.54
VPS8-211ENST00000452140 TOE1Q96GM8 510 aaKnown RBP5.46□□□□□ -1.54
VPS8-211ENST00000452140 SGPP1Q9BX95 441 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 EPB41L4BQ9H329 900 aa5.46□□□□□ -1.54
VPS8-211ENST00000452140 DCP1AQ9NPI6 582 aaPredicted RBP5.46□□□□□ -1.54
VPS8-211ENST00000452140 LRRC10BA6NIK2 292 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 ULK1O75385 1050 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 C8BP07358 591 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 FBLN1P23142 703 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 CDR1P51861 262 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 CR1LQ2VPA4 569 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 PHF19Q5T6S3 580 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 CD276Q5ZPR3 534 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 OLFML2BQ68BL8 750 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 LIPIQ6XZB0 460 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 STK32CQ86UX6 486 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 CMIPQ8IY22 773 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 DDX11Q96FC9 970 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 ASPSCR1Q9BZE9 553 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 MCOLN1Q9GZU1 580 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 CNTD2Q9H8S5 307 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 SLC39A2Q9NP94 309 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 ACSS2Q9NR19 701 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 TYW1Q9NV66 732 aaKnown RBP5.45□□□□□ -1.54
VPS8-211ENST00000452140 SIRT5Q9NXA8 310 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 MBD1Q9UIS9 605 aaPredicted RBP5.45□□□□□ -1.54
VPS8-211ENST00000452140 TRHDEQ9UKU6 1024 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 G3BP2Q9UN86 482 aaKnown RBP5.45□□□□□ -1.54
VPS8-211ENST00000452140 WASF3Q9UPY6 502 aa5.45□□□□□ -1.54
VPS8-211ENST00000452140 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.44□□□□□ -1.54
VPS8-211ENST00000452140 S100BP04271 92 aaPredicted RBP5.44□□□□□ -1.54
VPS8-211ENST00000452140 ATF2P15336 505 aa5.44□□□□□ -1.54
VPS8-211ENST00000452140 SDHAP31040 664 aa5.44□□□□□ -1.54
VPS8-211ENST00000452140 EPHB3P54753 998 aa5.44□□□□□ -1.54
VPS8-211ENST00000452140 SESN3P58005 492 aa5.44□□□□□ -1.54
VPS8-211ENST00000452140 EXOSC10Q01780 885 aaKnown RBP5.44□□□□□ -1.54
VPS8-211ENST00000452140 DBPQ10586 325 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms