RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 MICALL1Q8N3F8 863 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 SCFD1Q8WVM8 642 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 IQCDQ96DY2 449 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 RIC8AQ9NPQ8 531 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 DAGLAQ9Y4D2 1042 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 RPS6KL1Q9Y6S9 549 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 CDK5RAP2Q96SN8 1893 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 EIF3HO15372 352 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNXB-203ENST00000451343 GTF2IP78347 998 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 NNTQ13423 1086 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 PDIA5Q14554 519 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 CCDC97Q96F63 343 aaPredicted RBP12.64□□□□□ -0.39
TNXB-203ENST00000451343 GRID2IPA4D2P6 1211 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 GOLGA8KD6RF30 607 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 OPA1O60313 960 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 KRT18P05783 430 aaKnown RBP12.64□□□□□ -0.39
TNXB-203ENST00000451343 PLA2G4BP0C869 781 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 SLC9A1P19634 815 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 NAB2Q15742 525 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 POLLQ9UGP5 575 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 FAM169AQ9Y6X4 670 aa12.64□□□□□ -0.39
TNXB-203ENST00000451343 C6orf229H3BNL8 230 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 RAD51CO43502 376 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 EPS15P42566 896 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 GUCY1A3Q02108 690 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 ADAM9Q13443 819 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 CFAP58Q5T655 872 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 ANKRD23Q86SG2 305 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 DDX42Q86XP3 938 aaKnown RBP eCLIP12.63□□□□□ -0.39
TNXB-203ENST00000451343 INPP4AQ96PE3 977 aaPredicted RBP12.63□□□□□ -0.39
TNXB-203ENST00000451343 IKZF4Q9H2S9 585 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 ABCB11O95342 1321 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
TNXB-203ENST00000451343 MED24O75448 989 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 PSMC6P62333 389 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 PSMD2Q13200 908 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 ASIC2Q16515 512 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 SLC18A3Q16572 532 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 ASPRV1Q53RT3 343 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 IFT20Q8IY31 132 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 CAVIN3Q969G5 261 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
TNXB-203ENST00000451343 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 RBAK-RBAKDNI3L0D1 243 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 EBAG9O00559 213 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 KCNK3O14649 394 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 CYP11B2P19099 503 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 SCNN1DP51172 638 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 PTK2Q05397 1052 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 KCNH2Q12809 1159 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 SLC30A10Q6XR72 485 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 RNF10Q8N5U6 811 aaKnown RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 RNPC3Q96LT9 517 aaKnown RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 GANQ9H2C0 597 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 GDF3Q9NR23 364 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 EMILIN3Q9NT22 766 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 PCDHA2Q9Y5H9 948 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 NR2F2P24468 414 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 SMARCA1P28370 1054 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 ORC2Q13416 577 aaPredicted RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 MEI1Q5TIA1 1274 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 OR2W6PQ8NHA6 318 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 CUL5Q93034 780 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 AP1M1Q9BXS5 423 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 KCTD10Q9H3F6 313 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 CALRP27797 417 aaKnown RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 PABPC4Q13310 644 aaKnown RBP eCLIP12.62□□□□□ -0.39
TNXB-203ENST00000451343 HLTFQ14527 1009 aaKnown RBP eCLIP12.62□□□□□ -0.39
TNXB-203ENST00000451343 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 GJB7Q6PEY0 223 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 ZNF571Q7Z3V5 609 aaPredicted RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 TADA2BQ86TJ2 420 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 RPAINQ86UA6 219 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 CCDC65Q8IXS2 484 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 KAT2BQ92831 832 aa12.62□□□□□ -0.39
TNXB-203ENST00000451343 PAIP2Q9BPZ3 127 aaKnown RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
TNXB-203ENST00000451343 MYH7BA7E2Y1 1941 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 NDUFAB1O14561 156 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 PLCG2P16885 1265 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 NOVP48745 357 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 CLK2P49760 499 aaKnown RBP12.61□□□□□ -0.39
TNXB-203ENST00000451343 NT5C2P49902 561 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 DDR1Q08345 913 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 ALS2CLQ60I27 953 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 IQCKQ8N0W5 287 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 PPM1EQ8WY54 764 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 P2RX7Q99572 595 aaKnown RBP12.61□□□□□ -0.39
TNXB-203ENST00000451343 FAM107BQ9H098 131 aa12.61□□□□□ -0.39
TNXB-203ENST00000451343 SHTN1A0MZ66 631 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms