RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 MIS18BP1Q6P0N0 1132 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 PPP1R13LQ8WUF5 828 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 GLG1Q92896 1179 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 UNC45AQ9H3U1 944 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 TCEAL9Q9UHQ7 104 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 TET1Q8NFU7 2136 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 ARID2Q68CP9 1835 aa16.22■□□□□ 0.19
COL3A1-203ENST00000450867 NRCAMQ92823 1304 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 A0A1W2PPC1 479 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 PSAPP07602 524 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 RAG1P15918 1043 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 SPIRE1Q08AE8 756 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 PTK7Q13308 1070 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 PLCB4Q15147 1175 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 TRIM71Q2Q1W2 868 aaKnown RBP16.21■□□□□ 0.19
COL3A1-203ENST00000450867 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
COL3A1-203ENST00000450867 SERINC5Q86VE9 423 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 LMBR1Q8WVP7 490 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 DHX38Q92620 1227 aaKnown RBP16.21■□□□□ 0.19
COL3A1-203ENST00000450867 GJA10Q969M2 543 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 UIMC1Q96RL1 719 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 DISC1Q9NRI5 854 aa16.21■□□□□ 0.19
COL3A1-203ENST00000450867 LOXHD1Q8IVV2 1947 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 C17orf102A2RUQ5 167 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 MBLAC1A4D2B0 266 aaPredicted RBP16.2■□□□□ 0.18
COL3A1-203ENST00000450867 NEMFO60524 1076 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 GNAT1P11488 350 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 CYP2C9P11712 490 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 ATP4AP20648 1035 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 TNPO1Q92973 898 aaKnown RBP16.2■□□□□ 0.18
COL3A1-203ENST00000450867 LBHD1Q9BQE6 289 aaPredicted RBP16.2■□□□□ 0.18
COL3A1-203ENST00000450867 WNT8AQ9H1J5 351 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 ZNF302Q9NR11 478 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 COL1A2P08123 1366 aa16.2■□□□□ 0.18
COL3A1-203ENST00000450867 RRN3P2A6NIE6 340 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 H3BQV1 296 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 BAG4O95429 457 aaKnown RBP16.19■□□□□ 0.18
COL3A1-203ENST00000450867 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
COL3A1-203ENST00000450867 CHMP4BP1P59074 171 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 PPFIA1Q13136 1202 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 GNL2Q13823 731 aaKnown RBP16.19■□□□□ 0.18
COL3A1-203ENST00000450867 CALCRLQ16602 461 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 TTC38Q5R3I4 469 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 SWSAP1Q6NVH7 229 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 RPAINQ86UA6 219 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 CCDC155Q8N6L0 562 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 BADQ92934 168 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 SETD4Q9NVD3 440 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
COL3A1-203ENST00000450867 NOD1Q9Y239 953 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 UMODL1Q5DID0 1318 aa16.19■□□□□ 0.18
COL3A1-203ENST00000450867 POTEB3A0JP26 581 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 BACH1O14867 736 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 ZNF862O60290 1169 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 HBP1O60381 514 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 CAND2O75155 1236 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 INSRRP14616 1297 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 CYP2C18P33260 490 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 ZNF200P98182 395 aaPredicted RBP16.18■□□□□ 0.18
COL3A1-203ENST00000450867 MDM2Q00987 491 aaPredicted RBP16.18■□□□□ 0.18
COL3A1-203ENST00000450867 FPGSQ05932 587 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 BFSP2Q13515 415 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 GRIK4Q16099 956 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 RILPL1Q5EBL4 403 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 MARCH8Q5T0T0 291 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 PDXDC2PQ6P474 469 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 POTEBQ6S5H4 581 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 MIER3Q7Z3K6 550 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 BBXQ8WY36 941 aaPredicted RBP16.18■□□□□ 0.18
COL3A1-203ENST00000450867 ATP6V0A1Q93050 837 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 FAM167AQ96KS9 214 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 PPP1R12CQ9BZL4 782 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 TMEM60Q9H2L4 133 aa16.18■□□□□ 0.18
COL3A1-203ENST00000450867 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
COL3A1-203ENST00000450867 ZBTB42B2RXF5 422 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 EML1O00423 815 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 TREHO43280 583 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 SYT1P21579 422 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 MARK3P27448 753 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 MCM7P33993 719 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 UGCGQ16739 394 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 TRAF7Q6Q0C0 670 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 BRAPQ7Z569 592 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 TMEM199Q8N511 208 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 C4orf32Q8N8J7 132 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 WNT8BQ93098 351 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 VWCEQ96DN2 955 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
COL3A1-203ENST00000450867 PCDH10Q9P2E7 1040 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 GABBR1Q9UBS5 961 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 SAMM50Q9Y512 469 aa16.17■□□□□ 0.18
COL3A1-203ENST00000450867 CHMP2AO43633 222 aa16.16■□□□□ 0.18
COL3A1-203ENST00000450867 STBD1O95210 358 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms