RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 HOOK3Q86VS8 718 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 ANKLE2Q86XL3 938 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 PHC3Q8NDX5 983 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 FERMT2Q96AC1 680 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 TRIM47Q96LD4 638 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 RAB3IPQ96QF0 476 aaPredicted RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 PRMT1Q99873 361 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 PREBQ9HCU5 417 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 INTS9Q9NV88 658 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 CTNNAL1Q9UBT7 734 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 SCOCQ9UIL1 159 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 COLQQ9Y215 455 aaPredicted RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 USP15Q9Y4E8 981 aaPredicted RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 SMAPO00193 183 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 LGR5O75473 907 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 PENKP01210 267 aaPredicted RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 RPN1P04843 607 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 PMS1P54277 932 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 RASSF7Q02833 373 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 AIMP1Q12904 312 aaKnown RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 IRGCQ6NXR0 463 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 STK32AQ8WU08 396 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 DNAJC9Q8WXX5 260 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 RMI1Q9H9A7 625 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 LRRC4CQ9HCJ2 640 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
LSM5-208ENST00000450169 DENND2AQ9ULE3 1009 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 TRIM33Q9UPN9 1127 aa9.39□□□□□ -0.91
LSM5-208ENST00000450169 BTBD11A6QL63 1104 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 NEURL1BA8MQ27 555 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 SUN1O94901 812 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 FTCDO95954 541 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 TPBGLP0DKB5 382 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 DESP17661 470 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 ALDH1B1P30837 517 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 GCKRQ14397 625 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.38□□□□□ -0.91
LSM5-208ENST00000450169 TRIM22Q8IYM9 498 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 ADSSL1Q8N142 457 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 IQCDQ96DY2 449 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 LTV1Q96GA3 475 aaPredicted RBP9.38□□□□□ -0.91
LSM5-208ENST00000450169 GJD4Q96KN9 370 aaPredicted RBP9.38□□□□□ -0.91
LSM5-208ENST00000450169 ADAM7Q9H2U9 754 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 CYP39A1Q9NYL5 469 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 BIN2Q9UBW5 565 aaPredicted RBP9.38□□□□□ -0.91
LSM5-208ENST00000450169 TMEM59LQ9UK28 342 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 PNMA3Q9UL41 463 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 TMCO1Q9UM00 188 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 ZNF510Q9Y2H8 683 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 BCL9O00512 1426 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 GPR37L1O60883 481 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 PEX11AO75192 247 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 PALMO75781 387 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 IFIT1P09914 478 aaKnown RBP9.38□□□□□ -0.91
LSM5-208ENST00000450169 IFNAR1P17181 557 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 GSTT1P30711 240 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
LSM5-208ENST00000450169 NEXNQ0ZGT2 675 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 MUM1Q2TAK8 710 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 SLC17A8Q8NDX2 589 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 NGDNQ8NEJ9 315 aaKnown RBP9.38□□□□□ -0.91
LSM5-208ENST00000450169 ASAP3Q8TDY4 903 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 FAM136AQ96C01 138 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 MTRQ99707 1265 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 TRIM7Q9C029 511 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 LGR6Q9HBX8 967 aa9.38□□□□□ -0.91
LSM5-208ENST00000450169 NWD1Q149M9 1564 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 O00370 1275 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 SPTLC1O15269 473 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 CCNB1P14635 433 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 SKIV2L2P42285 1042 aaKnown RBP9.37□□□□□ -0.91
LSM5-208ENST00000450169 SLC1A4P43007 532 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 IFNAR2P48551 515 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 DIXDC1Q155Q3 683 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 STAG2Q8N3U4 1231 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 PIGOQ8TEQ8 1089 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 UCMAQ8WVF2 138 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 PGM2Q96G03 612 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 TMEM87BQ96K49 555 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 ERGIC2Q96RQ1 377 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 SLX1AQ9BQ83 275 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 FAM192AQ9GZU8 254 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 VCX3BQ9H321 246 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 RXFP1Q9HBX9 757 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 VCX3AQ9NNX9 186 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 CTTNBP2NLQ9P2B4 639 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 SLC12A7Q9Y666 1083 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 DISP2A7MBM2 1401 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 MYH1P12882 1939 aa9.37□□□□□ -0.91
LSM5-208ENST00000450169 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
LSM5-208ENST00000450169 PSMA7O14818 248 aa9.36□□□□□ -0.91
LSM5-208ENST00000450169 DAPK3O43293 454 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms