RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 ABRAQ8N0Z2 381 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 THEM5Q8N1Q8 247 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 MSANTD4Q8NCY6 345 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 FAM20AQ96MK3 541 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 TMEM260Q9NX78 707 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 TFAMQ00059 246 aaKnown RBP9.34□□□□□ -0.91
HCG18-238ENST00000449544 BTBD7Q9P203 1132 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 ANXA13P27216 316 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 CYP2C18P33260 490 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 RDXP35241 583 aaKnown RBP9.34□□□□□ -0.91
HCG18-238ENST00000449544 VPS36Q86VN1 386 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 LRRC71Q8N4P6 559 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 MSL3Q8N5Y2 521 aaKnown RBP9.34□□□□□ -0.91
HCG18-238ENST00000449544 SAMD3Q8N6K7 520 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 PPP1R13LQ8WUF5 828 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 CACTINQ8WUQ7 758 aaKnown RBP9.34□□□□□ -0.91
HCG18-238ENST00000449544 RPF1Q9H9Y2 349 aaKnown RBP9.34□□□□□ -0.91
HCG18-238ENST00000449544 LUC7LQ9NQ29 371 aaKnown RBP9.34□□□□□ -0.91
HCG18-238ENST00000449544 RGPD5Q99666 1765 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 WDR19Q8NEZ3 1342 aa9.34□□□□□ -0.91
HCG18-238ENST00000449544 A0A1W2PRG0 241 aa9.34□□□□□ -0.92
HCG18-238ENST00000449544 JAK2O60674 1132 aa9.34□□□□□ -0.92
HCG18-238ENST00000449544 PARNO95453 639 aaKnown RBP9.34□□□□□ -0.92
HCG18-238ENST00000449544 KIZQ2M2Z5 673 aa9.34□□□□□ -0.92
HCG18-238ENST00000449544 ZNF568Q3ZCX4 644 aa9.34□□□□□ -0.92
HCG18-238ENST00000449544 SLC30A10Q6XR72 485 aa9.34□□□□□ -0.92
HCG18-238ENST00000449544 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.92
HCG18-238ENST00000449544 CACNA1GO43497 2377 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 KLRC1P26715 233 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 CCND3P30281 292 aaPredicted RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 MCM4P33991 863 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 TRIM60Q495X7 471 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 DCAF17Q5H9S7 520 aaPredicted RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 NOSTRINQ8IVI9 506 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 DNAJB3Q8WWF6 145 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 JAKMIP2Q96AA8 810 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 CCDC127Q96BQ5 260 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 COLEC11Q9BWP8 271 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 SNX25Q9H3E2 840 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 CYP39A1Q9NYL5 469 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 DLATP10515 647 aaKnown RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 ACTR2P61160 394 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 TATDN1Q6P1N9 297 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 PIGOQ8TEQ8 1089 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 LSG1Q9H089 658 aaKnown RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 PXMP2Q9NR77 195 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 KCNH7Q9NS40 1196 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 SP100P23497 879 aaPredicted RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 TNNC1P63316 161 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 PRPF4BQ13523 1007 aaKnown RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 PFKFB3Q16875 520 aaPredicted RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 NUDT18Q6ZVK8 323 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 NELFCDQ8IXH7 590 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 SMAP1Q8IYB5 467 aaPredicted RBP9.33□□□□□ -0.92
HCG18-238ENST00000449544 GANCQ8TET4 914 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 COPS5Q92905 334 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 NOX5Q96PH1 765 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 SPAG5Q96R06 1193 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 SH2D3AQ9BRG2 576 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 MXRA8Q9BRK3 442 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 SEZ6LQ9BYH1 1024 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 RIC8AQ9NPQ8 531 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 BARHL2Q9NY43 387 aa9.33□□□□□ -0.92
HCG18-238ENST00000449544 BIN1O00499 593 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 CLDN3O15551 220 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 STX10O60499 249 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 PEX3P56589 373 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
HCG18-238ENST00000449544 NFKBIBQ15653 356 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 DUSP28Q4G0W2 176 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 MUM1L1Q5H9M0 696 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 C17orf99Q6UX52 265 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 SCN4BQ8IWT1 228 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 PGBD3Q8N328 593 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 BHMT2Q9H2M3 363 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 EPB41P11171 864 aaKnown RBP9.32□□□□□ -0.92
HCG18-238ENST00000449544 XRCC5P13010 732 aaKnown RBP9.32□□□□□ -0.92
HCG18-238ENST00000449544 TSPY1Q01534 308 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 PTGDRQ13258 359 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 ADCK5Q3MIX3 580 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 ZNF484Q5JVG2 852 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 DDX19AQ9NUU7 478 aaKnown RBP9.32□□□□□ -0.92
HCG18-238ENST00000449544 DIS3Q9Y2L1 958 aaKnown RBP9.32□□□□□ -0.92
HCG18-238ENST00000449544 EMSYQ7Z589 1322 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 TYW5A2RUC4 315 aaKnown RBP9.32□□□□□ -0.92
HCG18-238ENST00000449544 SELPP16109 830 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 KLRC2P26717 231 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 CETN2P41208 172 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 SLC26A2P50443 739 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 USP11P51784 963 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 RASEFQ8IZ41 740 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 SYNPO2Q9UMS6 1093 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 PHLPP2Q6ZVD8 1323 aa9.32□□□□□ -0.92
HCG18-238ENST00000449544 INSRRP14616 1297 aa9.31□□□□□ -0.92
HCG18-238ENST00000449544 CAPN2P17655 700 aa9.31□□□□□ -0.92
HCG18-238ENST00000449544 CYP2J2P51589 502 aa9.31□□□□□ -0.92
HCG18-238ENST00000449544 PRKCEQ02156 737 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms