RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 FAM117BQ6P1L5 589 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 RUFY4Q6ZNE9 571 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 NIPA1Q7RTP0 329 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 CCDC148Q8NFR7 591 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 BICD2Q8TD16 824 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 RASGRP4Q8TDF6 673 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 SEPT8Q92599 483 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 PCYT2Q99447 389 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 OSBPL7Q9BZF2 842 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 TUBE1Q9UJT0 475 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 TRANK1O15050 2925 aa20.15■□□□□ 0.82
DDX56-207ENST00000448192 SIP14410 1827 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 RFXAPO00287 272 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 CPLX1O14810 134 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 ARHGEF15O94989 841 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 CYP3A4P08684 503 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 SSRP1Q08945 709 aaKnown RBP20.14■□□□□ 0.81
DDX56-207ENST00000448192 STK3Q13188 491 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 TAF2Q6P1X5 1199 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.14■□□□□ 0.81
DDX56-207ENST00000448192 TRIM22Q8IYM9 498 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 CRYGNQ8WXF5 182 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 ARNTL2Q8WYA1 636 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 ZNF274Q96GC6 653 aaPredicted RBP20.14■□□□□ 0.81
DDX56-207ENST00000448192 PDRG1Q9NUG6 133 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 TRPC6Q9Y210 931 aa20.14■□□□□ 0.81
DDX56-207ENST00000448192 IGLV3-22A0A075B6J6 115 aa20.13■□□□□ 0.81
DDX56-207ENST00000448192 LCHNA4D1U4 455 aa20.13■□□□□ 0.81
DDX56-207ENST00000448192 GJB5O95377 273 aa20.13■□□□□ 0.81
DDX56-207ENST00000448192 INSRRP14616 1297 aa20.13■□□□□ 0.81
DDX56-207ENST00000448192 STAT5BP51692 787 aa20.13■□□□□ 0.81
DDX56-207ENST00000448192 FAM26DQ5JW98 314 aa20.13■□□□□ 0.81
DDX56-207ENST00000448192 RSPH3Q86UC2 560 aa20.13■□□□□ 0.81
DDX56-207ENST00000448192 RRN3P2A6NIE6 340 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 IPO5O00410 1097 aaKnown RBP20.12■□□□□ 0.81
DDX56-207ENST00000448192 CCNE2O96020 404 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 AMHP03971 560 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 NLRP5P59047 1200 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 PLCB4Q15147 1175 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 MARCH8Q5T0T0 291 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 PLPPR4Q7Z2D5 763 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 MICALL1Q8N3F8 863 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 DNAJB3Q8WWF6 145 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 TNPO1Q92973 898 aaKnown RBP20.12■□□□□ 0.81
DDX56-207ENST00000448192 ZBTB10Q96DT7 871 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 RAD9AQ99638 391 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 ZNF577Q9BSK1 485 aa20.12■□□□□ 0.81
DDX56-207ENST00000448192 MBLAC1A4D2B0 266 aaPredicted RBP20.11■□□□□ 0.81
DDX56-207ENST00000448192 BACH1O14867 736 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 ATG7O95352 703 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 CHRNA1P02708 482 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 PRR16Q569H4 304 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 CPLX2Q6PUV4 134 aaKnown RBP20.11■□□□□ 0.81
DDX56-207ENST00000448192 SPRED2Q7Z698 418 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 TRAPPC12Q8WVT3 735 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 IFIH1Q9BYX4 1025 aaKnown RBP20.11■□□□□ 0.81
DDX56-207ENST00000448192 FAM49AQ9H0Q0 323 aaPredicted RBP20.11■□□□□ 0.81
DDX56-207ENST00000448192 PRDM6Q9NQX0 595 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 SH3GLB2Q9NR46 395 aa20.11■□□□□ 0.81
DDX56-207ENST00000448192 MYH9P35579 1960 aaKnown RBP20.1■□□□□ 0.81
DDX56-207ENST00000448192 REV3LO60673 3130 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 LOXHD1Q8IVV2 1947 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 POTEB3A0JP26 581 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 EPOPA6NHQ4 379 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 DHX15O43143 795 aaKnown RBP20.1■□□□□ 0.81
DDX56-207ENST00000448192 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
DDX56-207ENST00000448192 SETQ01105 290 aaPredicted RBP20.1■□□□□ 0.81
DDX56-207ENST00000448192 FAM160B1Q5W0V3 765 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 POTEBQ6S5H4 581 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 ABHD15Q6UXT9 468 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 RPAINQ86UA6 219 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 COL25A1Q9BXS0 654 aaPredicted RBP20.1■□□□□ 0.81
DDX56-207ENST00000448192 TBC1D22BQ9NU19 505 aa20.1■□□□□ 0.81
DDX56-207ENST00000448192 COL4A4P53420 1690 aaPredicted RBP20.1■□□□□ 0.81
DDX56-207ENST00000448192 GTPBP6O43824 516 aaPredicted RBP20.09■□□□□ 0.81
DDX56-207ENST00000448192 UPP2O95045 317 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 DEXIO95424 95 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 GHRP10912 638 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 SLC26A2P50443 739 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
DDX56-207ENST00000448192 MIS18BP1Q6P0N0 1132 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 APBB2Q92870 758 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 ZNF302Q9NR11 478 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 TCEAL9Q9UHQ7 104 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 MTUS1Q9ULD2 1270 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 INSL6Q9Y581 213 aa20.09■□□□□ 0.81
DDX56-207ENST00000448192 VCANP13611 3396 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 WDR81Q562E7 1941 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 IGKV6D-21A0A0A0MT36 114 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 MRPS6P82932 125 aaKnown RBP20.08■□□□□ 0.81
DDX56-207ENST00000448192 MGAT3Q09327 533 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 LPIN1Q14693 890 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 SWSAP1Q6NVH7 229 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 PDXDC2PQ6P474 469 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 CCDC60Q8IWA6 550 aaPredicted RBP20.08■□□□□ 0.81
DDX56-207ENST00000448192 PCDHA4Q9UN74 947 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 CDY2AQ9Y6F7 541 aa20.08■□□□□ 0.81
DDX56-207ENST00000448192 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.07■□□□□ 0.8
DDX56-207ENST00000448192 LINC01553A4QN01 128 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms