RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NOX5Q96PH1 765 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 GORASP1Q9BQQ3 440 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 RIC8BQ9NVN3 520 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 BTBD7Q9P203 1132 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 RBPJLQ9UBG7 517 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
HMGB1P48-201ENST00000446155 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 TMEM253P0C7T8 217 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 CYP2C8P10632 490 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 LIMS1P48059 325 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 ITGA1P56199 1179 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 NKX3-2P78367 333 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 FOXO4P98177 505 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 AMPD3Q01432 767 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 DBPQ10586 325 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 ADAM9Q13443 819 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 CD300LDQ6UXZ3 194 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 LIPIQ6XZB0 460 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 FAM129CQ86XR2 697 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 OR2W6PQ8NHA6 318 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 CHTF18Q8WVB6 975 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 DDX11Q96FC9 970 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 YIPF4Q9BSR8 244 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 PCDH18Q9HCL0 1135 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 OXSMQ9NWU1 459 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 H2AFY2Q9P0M6 372 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 KLHL42Q9P2K6 505 aa6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 ARID4BQ4LE39 1312 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P48-201ENST00000446155 ZNF839A8K0R7 811 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 TGM5O43548 720 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 MPIG6BO95866 241 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 AOAHP28039 575 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 LSSP48449 732 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 SCNN1BP51168 640 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 CAP1Q01518 475 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 DDX46Q7L014 1031 aaKnown RBP6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 EFHBQ8N7U6 833 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 DTX3Q8N9I9 347 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 C11orf84Q9BUA3 381 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 ZKSCAN5Q9Y2L8 839 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 SPO11Q9Y5K1 396 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 IRAK3Q9Y616 596 aa6.12□□□□□ -1.43
HMGB1P48-201ENST00000446155 H7C1D1 291 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 NFIBO00712 420 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 NEMP1O14524 444 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 GAS7O60861 476 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 HIP1RO75146 1068 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 KRT37O76014 449 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 MMEP08473 750 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 FNTBP49356 437 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 KIF11P52732 1056 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 DLX2Q07687 328 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 RTP5Q14D33 572 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 EP400NLQ6ZTU2 488 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 KIAA1958Q8N8K9 716 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 FNIP1Q8TF40 1166 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 ASB15Q8WXK1 588 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 C16orf92Q96LL3 132 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 SLC38A3Q99624 504 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 PCDH12Q9NPG4 1184 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 ACSS2Q9NR19 701 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 THG1LQ9NWX6 298 aaKnown RBP6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 FAN1Q9Y2M0 1017 aa6.11□□□□□ -1.43
HMGB1P48-201ENST00000446155 TCAF2A6NFQ2 919 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 PRAMEF25A6NGN4 478 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 FOXP2O15409 715 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 ZEB2O60315 1214 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 FKBP9O95302 570 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 PI3P19957 117 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 LINC00310P59036 64 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 STRN3Q13033 797 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 VWA3BQ502W6 1294 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 PRR31Q5SQ13 230 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 ESRP1Q6NXG1 681 aaKnown RBP6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 FKBP9P1Q75LS8 142 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 RTN4RL1Q86UN2 441 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 KYQ8NBH2 561 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 DACT3Q96B18 629 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 FOXRED1Q96CU9 486 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 ELF4Q99607 663 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 ZMAT4Q9H898 229 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 EMC7Q9NPA0 242 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 SPTLC3Q9NUV7 552 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
HMGB1P48-201ENST00000446155 C8AP07357 584 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 ENO2P09104 434 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 SLC9A1P19634 815 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 PTX3P26022 381 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 MC4RP32245 332 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 ID4P47928 161 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 SMAD3P84022 425 aaKnown RBP6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 NFKB2Q00653 900 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 PFKPQ01813 784 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 TMEM132BQ14DG7 1078 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 EPHA7Q15375 998 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 SMAD2Q15796 467 aaKnown RBP6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 KCNA10Q16322 511 aa6.09□□□□□ -1.43
HMGB1P48-201ENST00000446155 VASNQ6EMK4 673 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms