RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 SAMD3Q8N6K7 520 aa11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 OTUD7AQ8TE49 926 aaPredicted RBP11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 PBXIP1Q96AQ6 731 aa11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 MSLNLQ96KJ4 702 aa11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 PDCD2LQ9BRP1 358 aa11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 RC3H2Q9HBD1 1191 aaKnown RBP11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 CD207Q9UJ71 328 aa11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 CACNA1HO95180 2353 aa11.5□□□□□ -0.57
UBE2D4-206ENST00000446008 KMT2EQ8IZD2 1858 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 TMEM221A6NGB7 291 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 M0R296 226 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 RNF40O75150 1001 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 TBX10O75333 385 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 CFBP00751 764 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 SMIM10L2AP0DMW4 78 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 SMIM10L2BP0DMW5 78 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 MX1P20591 662 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 ADAM17P78536 824 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 SP2Q02086 613 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 TCF15Q12870 199 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 CLUL1Q15846 466 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 MCMDC2Q4G0Z9 681 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 ASPRV1Q53RT3 343 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 VSIG10LQ86VR7 867 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 PNMA1Q8ND90 353 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 PLVAPQ9BX97 442 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 ALG13Q9NP73 1137 aaKnown RBP11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 TSR3Q9UJK0 312 aaKnown RBP11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 SALL3Q9BXA9 1300 aa11.49□□□□□ -0.57
UBE2D4-206ENST00000446008 LOC730098B7Z3J9 87 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 OPLAHO14841 1288 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 MMP1P03956 469 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 CTSHP09668 335 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 GNAT1P11488 350 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 MYCLP12524 364 aaPredicted RBP11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 ZXDAP98168 799 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 CAMK1Q14012 370 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 CBX2Q14781 532 aaPredicted RBP11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 METTL3Q86U44 580 aaKnown RBP11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 FBXL6Q8N531 539 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 ESR2Q92731 530 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 P2RX5Q93086 422 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 USP26Q9BXU7 913 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 RNF41Q9H4P4 317 aaPredicted RBP11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 JMJD4Q9H9V9 463 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 MLXIPQ9HAP2 919 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 RCAN3Q9UKA8 241 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 ADGRA3Q8IWK6 1321 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 PTPRZ1P23471 2315 aaPredicted RBP11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 MYO15AQ9UKN7 3530 aa11.48□□□□□ -0.57
UBE2D4-206ENST00000446008 LINC01565O15544 149 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 LGALS2P05162 132 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 UBA1P22314 1058 aaKnown RBP11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 HAND2P61296 217 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 FOXK2Q01167 660 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 PGM5Q15124 567 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 NAALADL2Q58DX5 795 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 SUGP1Q8IWZ8 645 aaKnown RBP11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 SMRP1Q8NCR6 262 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 FAM227BQ96M60 508 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 AMNQ9BXJ7 453 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 IRF2BPLQ9H1B7 796 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 IGFLR1Q9H665 355 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 EHMT1Q9H9B1 1298 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 SETD4Q9NVD3 440 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 PLAGL2Q9UPG8 496 aa11.47□□□□□ -0.57
UBE2D4-206ENST00000446008 ZFHX2Q9C0A1 2572 aaPredicted RBP11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 A0A0D9SFI3 127 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 ENPP3O14638 875 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 SORBS3O60504 671 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 COASYQ13057 564 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 IQCA1Q86XH1 822 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 TBC1D10CQ8IV04 446 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 PPP2R3CQ969Q6 453 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 MTMR8Q96EF0 704 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 KAT14Q9H8E8 782 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 VAT1LQ9HCJ6 419 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 CLEC1BQ9P126 229 aa11.46□□□□□ -0.57
UBE2D4-206ENST00000446008 DOCK5Q9H7D0 1870 aa11.46□□□□□ -0.58
UBE2D4-206ENST00000446008 SPTBN4Q9H254 2564 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 DMDP11532 3685 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 NEDD4P46934 1319 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 CCDC171Q6TFL3 1326 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 KIAA1671Q9BY89 1806 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 DGKIO75912 1065 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 CHRNA1P02708 482 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 PARP1P09874 1014 aaKnown RBP11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 CCND2P30279 289 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 ICAM3P32942 547 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 NDUFV1P49821 464 aa11.45□□□□□ -0.58
UBE2D4-206ENST00000446008 RRP1P56182 461 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms