RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 MDM1Q8TC05 714 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 CD209Q9NNX6 404 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 MTMR4Q9NYA4 1195 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 FBXL5Q9UKA1 691 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 HDAC9Q9UKV0 1011 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 EP400Q96L91 3159 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 GOLGA6L10A6NI86 522 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 TTI1O43156 1089 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 PPP4CP60510 307 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 GSTO1P78417 241 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
ERCC3-203ENST00000445889 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
ERCC3-203ENST00000445889 PDIA5Q14554 519 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 ARSHQ5FYA8 562 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 IRF2BP2Q7Z5L9 587 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 ARHGEF1Q92888 912 aaKnown RBP15.57■□□□□ 0.08
ERCC3-203ENST00000445889 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
ERCC3-203ENST00000445889 ZNF287Q9HBT7 754 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 CNOT8Q9UFF9 292 aaKnown RBP15.57■□□□□ 0.08
ERCC3-203ENST00000445889 TSKSQ9UJT2 592 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 NOVA2Q9UNW9 492 aaKnown RBP15.57■□□□□ 0.08
ERCC3-203ENST00000445889 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 IRS2Q9Y4H2 1338 aa15.57■□□□□ 0.08
ERCC3-203ENST00000445889 SMIM23A6NLE4 172 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 KRIT1O00522 736 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 RIMBP2O15034 1052 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 KIF4AO95239 1232 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 LDHCP07864 332 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 UCHL3P15374 230 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 CYP11B2P19099 503 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 ABCB4P21439 1286 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 FNTAP49354 379 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 RHBDL3P58872 404 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 KSR1Q8IVT5 923 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 UHMK1Q8TAS1 419 aaKnown RBP15.56■□□□□ 0.08
ERCC3-203ENST00000445889 NYXQ9GZU5 481 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 GANQ9H2C0 597 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 KCTD10Q9H3F6 313 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 PSTPIP2Q9H939 334 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 OSGEPQ9NPF4 335 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 CHORDC1Q9UHD1 332 aaPredicted RBP15.56■□□□□ 0.08
ERCC3-203ENST00000445889 MYBP10242 640 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 TNNC1P63316 161 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 LLGL1Q15334 1064 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 PRPF38AQ8NAV1 312 aaKnown RBP15.56■□□□□ 0.08
ERCC3-203ENST00000445889 NCAPGQ9BPX3 1015 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 TRIM51Q9BSJ1 452 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.56■□□□□ 0.086e-7■■■■■ 168.7
ERCC3-203ENST00000445889 NOC2LQ9Y3T9 749 aaKnown RBP15.56■□□□□ 0.08
ERCC3-203ENST00000445889 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
ERCC3-203ENST00000445889 GCOM1H8Y6P7 765 aaPredicted RBP15.55■□□□□ 0.08
ERCC3-203ENST00000445889 MYZAPP0CAP1 466 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 POLD1P28340 1107 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 ZNF804AQ7Z570 1209 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 CCDC65Q8IXS2 484 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 CNPY4Q8N129 248 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 CABS1Q96KC9 395 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 LUC7LQ9NQ29 371 aaKnown RBP15.55■□□□□ 0.08
ERCC3-203ENST00000445889 NARFQ9UHQ1 456 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 NAGPAQ9UK23 515 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 PHF20L1A8MW92 1017 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 CETN3O15182 167 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 ZNF844Q08AG5 666 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 PSMD2Q13200 908 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 DAAM2Q86T65 1068 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 U2AF1L4Q8WU68 220 aaKnown RBP15.55■□□□□ 0.08
ERCC3-203ENST00000445889 CEP89Q96ST8 783 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 TMBIM4Q9HC24 238 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 RNF14Q9UBS8 474 aa15.55■□□□□ 0.08
ERCC3-203ENST00000445889 AKAP3O75969 853 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 GFPT2O94808 682 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 ACTN3Q08043 901 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 ZNF211Q13398 564 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 PRR16Q569H4 304 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 PEX26Q7Z412 305 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 SFR1Q86XK3 245 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 PROM2Q8N271 834 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 WHAMMQ8TF30 809 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 YY1AP1Q9H869 796 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 XIRP1Q702N8 1843 aaKnown RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 PON1P27169 355 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 SCNN1DP51172 638 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 MAGOHP61326 146 aaKnown RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 GTF2IP78347 998 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 EXOC3L4Q17RC7 722 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 AADACL2Q6P093 401 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 MAGOHBQ96A72 148 aaKnown RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 MYCBPQ99417 103 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 DDX4Q9NQI0 724 aaKnown RBP15.54■□□□□ 0.08
ERCC3-203ENST00000445889 AIPL1Q9NZN9 384 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 PHLPP1O60346 1717 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 ROBO3Q96MS0 1386 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 GPR75-ASB3A0A0A6YYF3 556 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 HOXD13P35453 343 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 MICALCLQ6ZW33 695 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 CCDC91Q7Z6B0 441 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 CYFIP2Q96F07 1278 aa15.54■□□□□ 0.08
ERCC3-203ENST00000445889 ISCUQ9H1K1 167 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms