RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 HINFPQ9BQA5 517 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 RHOXF2Q9BQY4 288 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 WDR11Q9BZH6 1224 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 HACL1Q9UJ83 578 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 PCDHB13Q9Y5F0 798 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 TMEM150BA6NC51 233 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 ACTN1P12814 892 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 EIF4A3P38919 411 aaKnown RBP18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 ZCWPW2Q504Y3 356 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 MUM1L1Q5H9M0 696 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 OTOP1Q7RTM1 612 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 NAPGQ99747 312 aaPredicted RBP18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 ZNF446Q9NWS9 450 aa18.56■□□□□ 0.56
LAPTM4B-201ENST00000445593 CYLC1P35663 651 aaPredicted RBP18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 SYT2Q8N9I0 419 aaPredicted RBP18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 NUP58Q9BVL2 599 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 DEFB129Q9H1M3 183 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 UNC45AQ9H3U1 944 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 SH2D4AQ9H788 454 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 ARHGAP20Q9P2F6 1191 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 CNOT7Q9UIV1 285 aaKnown RBP18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 ZNF263O14978 683 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 SLITRK3O94933 977 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 FAM13AO94988 1023 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 FECHP22830 423 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 CASP4P49662 377 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 MMP14P50281 582 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 SP4Q02446 784 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 UTP14CQ5TAP6 766 aaKnown RBP18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 MOXD1Q6UVY6 613 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 FAM83AQ86UY5 434 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 DNAAF5Q86Y56 855 aa18.55■□□□□ 0.56
LAPTM4B-201ENST00000445593 CIITAP33076 1130 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 KCNMA1Q12791 1236 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 ST7Q9NRC1 585 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 IPO5O00410 1097 aaKnown RBP18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 CHMP4BP1P59074 171 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 RAPGEF1Q13905 1077 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 RINT1Q6NUQ1 792 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 KCTD10Q9H3F6 313 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 MLXIPQ9HAP2 919 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 FEM1BQ9UK73 627 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 TBX3O15119 743 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 ATP1A1P05023 1023 aaKnown RBP18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 ITGB5P18084 799 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 GFPT1Q06210 699 aaPredicted RBP18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 COG2Q14746 738 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 SPA17Q15506 151 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
LAPTM4B-201ENST00000445593 PHF20L1A8MW92 1017 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 EFCAB8A8MWE9 144 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 PIK3CDO00329 1044 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 CETN3O15182 167 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 HOXD13P35453 343 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 NAP1L1P55209 391 aaKnown RBP18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 SEMA3FQ13275 785 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 TEPSINQ96N21 525 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 LXNQ9BS40 222 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 CDC23Q9UJX2 597 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 ZNF536O15090 1300 aa18.53■□□□□ 0.56
LAPTM4B-201ENST00000445593 PSMD10O75832 226 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 PRELPP51888 382 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 KIF11P52732 1056 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 COBLL1Q53SF7 1204 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 FAM160B2Q86V87 743 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 IFIH1Q9BYX4 1025 aaKnown RBP18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 TNIP1Q15025 636 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 MEA1Q16626 185 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 CNPY4Q8N129 248 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 GTPBP4Q9BZE4 634 aaKnown RBP18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 RPAP3Q9H6T3 665 aaPredicted RBP18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.52■□□□□ 0.561e-15■■■■■ 139.7
LAPTM4B-201ENST00000445593 PGAP2Q9UHJ9 254 aa18.52■□□□□ 0.56
LAPTM4B-201ENST00000445593 VCAM1P19320 739 aa18.52■□□□□ 0.55
LAPTM4B-201ENST00000445593 KRT83P78385 493 aa18.52■□□□□ 0.55
LAPTM4B-201ENST00000445593 KCNH2Q12809 1159 aa18.52■□□□□ 0.55
LAPTM4B-201ENST00000445593 PTPROQ16827 1216 aa18.52■□□□□ 0.55
LAPTM4B-201ENST00000445593 KNOP1Q1ED39 458 aaKnown RBP18.52■□□□□ 0.55
LAPTM4B-201ENST00000445593 RETREG2Q8NC44 543 aa18.52■□□□□ 0.55
LAPTM4B-201ENST00000445593 ZNF185O15231 689 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 BUB1O43683 1085 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 PEX10O60683 326 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 EYA4O95677 639 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 CYP3A4P08684 503 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 PNMA6AP0CW24 399 aaPredicted RBP18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 SLC9A1P19634 815 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 ANGEL2Q5VTE6 544 aaKnown RBP18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 PRPF38AQ8NAV1 312 aaKnown RBP18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 SLC16A10Q8TF71 515 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 GOLGA1Q92805 767 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 TAAR1Q96RJ0 339 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 WRNIP1Q96S55 665 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 HSD17B14Q9BPX1 270 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 JADE2Q9NQC1 790 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 KCNH7Q9NS40 1196 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 TESPA1A2RU30 521 aaPredicted RBP18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 AKAP3O75969 853 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 CYP2J2P51589 502 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 KIF5AQ12840 1032 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms