RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 STAT5BP51692 787 aa25.32■■□□□ 1.64
LMBR1-211ENST00000444719 RAB30Q15771 203 aa25.32■■□□□ 1.64
LMBR1-211ENST00000444719 GRIK4Q16099 956 aa25.32■■□□□ 1.64
LMBR1-211ENST00000444719 TBCKQ8TEA7 893 aa25.32■■□□□ 1.64
LMBR1-211ENST00000444719 MYLIPQ8WY64 445 aa25.32■■□□□ 1.64
LMBR1-211ENST00000444719 ATG7O95352 703 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 CIITAP33076 1130 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 SETQ01105 290 aaPredicted RBP25.31■■□□□ 1.64
LMBR1-211ENST00000444719 GRIN2CQ14957 1233 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 NPY5RQ15761 445 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 C8orf34Q49A92 452 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 CNKSR3Q6P9H4 555 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 RUFY4Q6ZNE9 571 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 ZBTB10Q96DT7 871 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 GJB4Q9NTQ9 266 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 TRPC6Q9Y210 931 aa25.31■■□□□ 1.64
LMBR1-211ENST00000444719 BACH1O14867 736 aa25.3■■□□□ 1.64
LMBR1-211ENST00000444719 INSRRP14616 1297 aa25.3■■□□□ 1.64
LMBR1-211ENST00000444719 PLCB4Q15147 1175 aa25.3■■□□□ 1.64
LMBR1-211ENST00000444719 ABHD15Q6UXT9 468 aa25.3■■□□□ 1.64
LMBR1-211ENST00000444719 OSBPL7Q9BZF2 842 aa25.3■■□□□ 1.64
LMBR1-211ENST00000444719 ORC3Q9UBD5 711 aaPredicted RBP25.3■■□□□ 1.64
LMBR1-211ENST00000444719 M0R2N6 131 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 BAIAP3O94812 1187 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 KCNJ6P48051 423 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 USP11P51784 963 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 MARCH8Q5T0T0 291 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 PLPPR4Q7Z2D5 763 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 DAGLBQ8NCG7 672 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 LENG9Q96B70 501 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 SLC9A7Q96T83 725 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 SLC28A3Q9HAS3 691 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 TBC1D22BQ9NU19 505 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 TUBE1Q9UJT0 475 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 STK36Q9NRP7 1315 aa25.29■■□□□ 1.64
LMBR1-211ENST00000444719 CDH23Q9H251 3354 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 WDR5P61964 334 aaKnown RBP25.28■■□□□ 1.64
LMBR1-211ENST00000444719 GALNT17Q6IS24 598 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 SWSAP1Q6NVH7 229 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 TMCO2Q7Z6W1 182 aaPredicted RBP25.28■■□□□ 1.64
LMBR1-211ENST00000444719 TRAPPC12Q8WVT3 735 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 GTF3C6Q969F1 213 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 PHF20Q9BVI0 1012 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 C22orf23Q9BZE7 217 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 PCDHA11Q9Y5I1 949 aa25.28■■□□□ 1.64
LMBR1-211ENST00000444719 IGKV6D-21A0A0A0MT36 114 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 POTEB3A0JP26 581 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 RRN3P2A6NIE6 340 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 DEFB103AP81534 67 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 IKBKEQ14164 716 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 FAM160B1Q5W0V3 765 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 MIS18BP1Q6P0N0 1132 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 POTEBQ6S5H4 581 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 HERC6Q8IVU3 1022 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 CCDC60Q8IWA6 550 aaPredicted RBP25.27■■□□□ 1.64
LMBR1-211ENST00000444719 DBF4BQ8NFT6 615 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 PHOSPHO2Q8TCD6 241 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 DNAJB3Q8WWF6 145 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 GJA10Q969M2 543 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 ZNF302Q9NR11 478 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 SIP14410 1827 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 LOXHD1Q8IVV2 1947 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 MICAL3Q7RTP6 2002 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 EVPLQ92817 2033 aa25.27■■□□□ 1.64
LMBR1-211ENST00000444719 ABHD14A-ACY1A0A1B0GW23 586 aa25.26■■□□□ 1.63
LMBR1-211ENST00000444719 MSH4O15457 936 aa25.26■■□□□ 1.63
LMBR1-211ENST00000444719 CAND2O75155 1236 aa25.26■■□□□ 1.63
LMBR1-211ENST00000444719 XBP1P17861 261 aa25.26■■□□□ 1.63
LMBR1-211ENST00000444719 NONOQ15233 471 aaKnown RBP eCLIP25.26■■□□□ 1.637e-7■■■■□ 24.1
LMBR1-211ENST00000444719 ZNF746Q6NUN9 644 aaPredicted RBP25.26■■□□□ 1.63
LMBR1-211ENST00000444719 PDXDC2PQ6P474 469 aa25.26■■□□□ 1.63
LMBR1-211ENST00000444719 TRMT1LQ7Z2T5 733 aaKnown RBP25.26■■□□□ 1.63
LMBR1-211ENST00000444719 FAM177A1Q8N128 213 aaPredicted RBP25.26■■□□□ 1.63
LMBR1-211ENST00000444719 TCEAL9Q9UHQ7 104 aa25.26■■□□□ 1.63
LMBR1-211ENST00000444719 CHD9Q3L8U1 2897 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 MBLAC1A4D2B0 266 aaPredicted RBP25.25■■□□□ 1.63
LMBR1-211ENST00000444719 TDP2O95551 362 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 CHRNA1P02708 482 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 FDPSP14324 419 aaKnown RBP25.25■■□□□ 1.63
LMBR1-211ENST00000444719 FOSL2P15408 326 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 INF2Q27J81 1249 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 TAF2Q6P1X5 1199 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 TNPO1Q92973 898 aaKnown RBP25.25■■□□□ 1.63
LMBR1-211ENST00000444719 FAM49AQ9H0Q0 323 aaPredicted RBP25.25■■□□□ 1.63
LMBR1-211ENST00000444719 PRDM12Q9H4Q4 367 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 SAMM50Q9Y512 469 aa25.25■■□□□ 1.63
LMBR1-211ENST00000444719 FOSBP53539 338 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 KRT76Q01546 638 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 PLEKHG4Q58EX7 1191 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 FAM26DQ5JW98 314 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 PPP2R2DQ66LE6 453 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 KRT25Q7Z3Z0 450 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 RSPH3Q86UC2 560 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 CKAP2LQ8IYA6 745 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 OXER1Q8TDS5 423 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 WASF1Q92558 559 aa25.24■■□□□ 1.63
LMBR1-211ENST00000444719 CCDC194A0A1B0GVG4 234 aa25.23■■□□□ 1.63
LMBR1-211ENST00000444719 KIF28PB7ZC32 967 aa25.23■■□□□ 1.63
LMBR1-211ENST00000444719 JAK2O60674 1132 aa25.23■■□□□ 1.63
LMBR1-211ENST00000444719 CA3P07451 260 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms