RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 JPH1Q9HDC5 661 aaPredicted RBP12.41□□□□□ -0.42
SF3A1-203ENST00000444440 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
SF3A1-203ENST00000444440 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
SF3A1-203ENST00000444440 RSPH10B2B2RC85 870 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 MAFGO15525 162 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 DHX15O43143 795 aaKnown RBP12.4□□□□□ -0.42
SF3A1-203ENST00000444440 CYP3A4P08684 503 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 RSPH10BP0C881 870 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 TAP1Q03518 808 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 NPY5RQ15761 445 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 GRIK4Q16099 956 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 PLEKHG4Q58EX7 1191 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
SF3A1-203ENST00000444440 TRAPPC12Q8WVT3 735 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 LENG9Q96B70 501 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 PLXNA4Q9HCM2 1894 aa12.4□□□□□ -0.42
SF3A1-203ENST00000444440 MBLAC1A4D2B0 266 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-203ENST00000444440 ATG7O95352 703 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 SEC24BO95487 1268 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 CHRNA1P02708 482 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 IGBP1P78318 339 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 MGAT3Q09327 533 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 PPFIA1Q13136 1202 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 PLCB4Q15147 1175 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 FAM26DQ5JW98 314 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 KRT40Q6A162 431 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 FAM117BQ6P1L5 589 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 PLA2G4DQ86XP0 818 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 TEX2Q8IWB9 1127 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 REXO1Q8N1G1 1221 aaKnown RBP12.39□□□□□ -0.43
SF3A1-203ENST00000444440 PHOSPHO2Q8TCD6 241 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 GLG1Q92896 1179 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 ZNF274Q96GC6 653 aaPredicted RBP12.39□□□□□ -0.43
SF3A1-203ENST00000444440 C6orf50Q9HD87 102 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 PDRG1Q9NUG6 133 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 ERAP1Q9NZ08 941 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 TPCN1Q9ULQ1 816 aa12.39□□□□□ -0.43
SF3A1-203ENST00000444440 NRCAMQ92823 1304 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 IGKV6D-21A0A0A0MT36 114 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 ABHD14A-ACY1A0A1B0GW23 586 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.38□□□□□ -0.43
SF3A1-203ENST00000444440 M0R2N6 131 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 EIF5BO60841 1220 aaKnown RBP12.38□□□□□ -0.43
SF3A1-203ENST00000444440 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
SF3A1-203ENST00000444440 LARGE1O95461 756 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 INSRRP14616 1297 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 ATP4AP20648 1035 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 KCNJ6P48051 423 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 SCRN1Q12765 414 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 ABHD15Q6UXT9 468 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
SF3A1-203ENST00000444440 DNAJB3Q8WWF6 145 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 PPM1EQ8WY54 764 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 GJA10Q969M2 543 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 GAS2L1Q99501 681 aaPredicted RBP12.38□□□□□ -0.43
SF3A1-203ENST00000444440 SDF4Q9BRK5 362 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 GLT8D2Q9H1C3 349 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 SMARCAD1Q9H4L7 1026 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 TUBE1Q9UJT0 475 aa12.38□□□□□ -0.43
SF3A1-203ENST00000444440 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
SF3A1-203ENST00000444440 DLL1O00548 723 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 TLL1O43897 1013 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 GJB5O95377 273 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 GNAT1P11488 350 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 IGFBP4P22692 258 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 ZNF76P36508 570 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
SF3A1-203ENST00000444440 IKBKEQ14164 716 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
SF3A1-203ENST00000444440 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
SF3A1-203ENST00000444440 GJB4Q9NTQ9 266 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 BRWD1Q9NSI6 2320 aa12.37□□□□□ -0.43
SF3A1-203ENST00000444440 C5orf42Q9H799 3197 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 ZBTB42B2RXF5 422 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 LPXNO60711 386 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 CAND2O75155 1236 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 GHRP10912 638 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 GNA11P29992 359 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 CIITAP33076 1130 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 STAT5BP51692 787 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 AK2P54819 239 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
SF3A1-203ENST00000444440 TMEM62Q0P6H9 643 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 LPIN1Q14693 890 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 PRR16Q569H4 304 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 PLPPR4Q7Z2D5 763 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 MYOCDQ8IZQ8 938 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 ARNTL2Q8WYA1 636 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 ZNF577Q9BSK1 485 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 COL25A1Q9BXS0 654 aaPredicted RBP12.36□□□□□ -0.43
SF3A1-203ENST00000444440 SH3GLB2Q9NR46 395 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 KCNJ14Q9UNX9 436 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 CDY2AQ9Y6F7 541 aa12.36□□□□□ -0.43
SF3A1-203ENST00000444440 MYO7AQ13402 2215 aa12.35□□□□□ -0.43
SF3A1-203ENST00000444440 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms