RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 HSPA2P54652 639 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 ARID5AQ03989 594 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 SPDYCQ5MJ68 293 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 SLF2Q8IX21 1173 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 CCDC26Q8TAB7 109 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 CUL5Q93034 780 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 CYFIP2Q96F07 1278 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 KCTD10Q9H3F6 313 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 INTUQ9ULD6 942 aa16.89■□□□□ 0.3
AP1S3-206ENST00000443700 NOC2LQ9Y3T9 749 aaKnown RBP16.89■□□□□ 0.3
AP1S3-206ENST00000443700 GMNCA6NCL1 334 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 SSBP05455 408 aaKnown RBP eCLIP16.89■□□□□ 0.29
AP1S3-206ENST00000443700 PAEPP09466 180 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 ECHS1P30084 290 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 HPDP32754 393 aaPredicted RBP16.89■□□□□ 0.29
AP1S3-206ENST00000443700 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 ADAM9Q13443 819 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 TPTE2Q6XPS3 522 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 GPBP1Q86WP2 473 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 NELFCDQ8IXH7 590 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.29
AP1S3-206ENST00000443700 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 P3H4Q92791 437 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 COA7Q96BR5 231 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 FAM114A2Q9NRY5 505 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 PCDHA12Q9UN75 941 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 PCDHA2Q9Y5H9 948 aa16.89■□□□□ 0.29
AP1S3-206ENST00000443700 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 PNMA6FA0A0J9YX94 578 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 H0YGN5 161 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 MYO1FO00160 1098 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 ZPR1O75312 459 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
AP1S3-206ENST00000443700 PLA2G4BP0C869 781 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
AP1S3-206ENST00000443700 MRPL12P52815 198 aaKnown RBP16.88■□□□□ 0.29
AP1S3-206ENST00000443700 GSCP56915 257 aaPredicted RBP16.88■□□□□ 0.29
AP1S3-206ENST00000443700 PPP2R2AP63151 447 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 C6orf89Q6UWU4 347 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 C15orf52Q6ZUT6 534 aaKnown RBP16.88■□□□□ 0.29
AP1S3-206ENST00000443700 RASGEF1CQ8N431 466 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 GLT8D2Q9H1C3 349 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 CENPHQ9H3R5 247 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 ANKIB1Q9P2G1 1089 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 SLC12A6Q9UHW9 1150 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 FBXL5Q9UKA1 691 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 NFS1Q9Y697 457 aa16.88■□□□□ 0.29
AP1S3-206ENST00000443700 FRMD3A2A2Y4 597 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 CHUKO15111 745 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 EDIL3O43854 480 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 KRT18P05783 430 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 SNHG28P0DPA3 235 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 RDXP35241 583 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 SEC24CP53992 1094 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 NPEPPSP55786 919 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 RNASE9P60153 205 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 PTK2Q05397 1052 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 ZNF844Q08AG5 666 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 ECM1Q16610 540 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 TAX1BP1Q86VP1 789 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 SCFD1Q8WVM8 642 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 UBLCP1Q8WVY7 318 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 HAS1Q92839 578 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 MXD3Q9BW11 206 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 SUCLA2Q9P2R7 463 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 NAGPAQ9UK23 515 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 FRMPD2Q68DX3 1309 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 KRIT1O00522 736 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 SART1O43290 800 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 GFPT2O94808 682 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 NR2F2P24468 414 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 EIF3BP55884 814 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 IFT88Q13099 833 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 UAP1Q16222 522 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 PPP2R5EQ16537 467 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 ALKBH5Q6P6C2 394 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 ZNF571Q7Z3V5 609 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 PEX26Q7Z412 305 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 IRF2BP2Q7Z5L9 587 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 CCDC13Q8IYE1 715 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 TPCN2Q8NHX9 752 aa16.87■□□□□ 0.29
AP1S3-206ENST00000443700 PPANQ9NQ55 473 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 ARMCX3Q9UH62 379 aaPredicted RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
AP1S3-206ENST00000443700 AHDC1Q5TGY3 1603 aaPredicted RBP16.86■□□□□ 0.29
AP1S3-206ENST00000443700 C5orf60A6NFR6 353 aa16.86■□□□□ 0.29
AP1S3-206ENST00000443700 TMCO5BA8MYB1 307 aa16.86■□□□□ 0.29
AP1S3-206ENST00000443700 CALUO43852 315 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms