RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 NKRFO15226 690 aaKnown RBP eCLIP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 AP5Z1O43299 807 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CALUO43852 315 aaPredicted RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PPP1R37O75864 691 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 DGAT1O75907 488 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 GFPT2O94808 682 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 DDNO94850 711 aaPredicted RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 EGFRP00533 1210 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 RPLP2P05387 115 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 TUBBP07437 444 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 NR3C2P08235 984 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC172P0C7W6 258 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CETPP11597 493 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 ITGB5P18084 799 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 GTF2F1P35269 517 aaKnown RBP eCLIP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 AFMP43652 599 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 GTF2A2P52657 109 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 COPB1P53618 953 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PSMC5P62195 406 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 ASIC1P78348 528 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MRPS9P82933 396 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 FMR1Q06787 632 aaKnown RBP eCLIP3.13□□□□□ -1.917e-8■■■■■ 35.5
LINC00393-201ENST00000443621 STK4Q13043 487 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SNAPC2Q13487 334 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MTMR2Q13614 643 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 VGLL4Q14135 290 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 GIT2Q14161 759 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 NOLC1Q14978 699 aaKnown RBP eCLIP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PPP2R5AQ15172 486 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SYCP1Q15431 976 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MEA1Q16626 185 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MAN2A1Q16706 1144 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 UBE2SQ16763 222 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 KNOP1Q1ED39 458 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 TSR1Q2NL82 804 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 USH1GQ495M9 461 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 VWA3BQ502W6 1294 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 BRDTQ58F21 947 aaPredicted RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 NOM1Q5C9Z4 860 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 FKBP15Q5T1M5 1219 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 C10orf76Q5T2E6 689 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 ARHGEF16Q5VV41 709 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 C9orf131Q5VYM1 1079 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 RINT1Q6NUQ1 792 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MAMDC4Q6UXC1 1216 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 C1orf186Q6ZWK4 172 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 ZNF720Q7Z2F6 126 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CCDC186Q7Z3E2 898 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PPFIBP1Q86W92 1011 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 IRF2BP1Q8IU81 584 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CLEC10AQ8IUN9 316 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SPICE1Q8N0Z3 855 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CSGALNACT2Q8N6G5 542 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 FAM133AQ8N9E0 248 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 OR8K1Q8NGG5 319 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 TRPM4Q8TD43 1214 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 AFAP1L1Q8TED9 768 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SPIRE2Q8WWL2 714 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 NELFBQ8WX92 580 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 TAF4BQ92750 862 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 KIFAP3Q92845 792 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 EMID1Q96A84 441 aaPredicted RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 JAKMIP2Q96AA8 810 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 FAM167AQ96KS9 214 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MED15Q96RN5 788 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 P2RX7Q99572 595 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 DNAJC7Q99615 494 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 EIF2AK1Q9BQI3 630 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 TUBGCP2Q9BSJ2 902 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SRRTQ9BXP5 876 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MOV10L1Q9BXT6 1211 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 NIFKQ9BYG3 293 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 NFKBIZQ9BYH8 718 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SPATC1LQ9H0A9 340 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 TAF1DQ9H5J8 278 aaPredicted RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PARVGQ9HBI0 331 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 KIAA1586Q9HCI6 787 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 AGO4Q9HCK5 861 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 LUC7LQ9NQ29 371 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PLCB1Q9NQ66 1216 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 RNF146Q9NTX7 359 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PANK4Q9NVE7 773 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 SLC5A4Q9NY91 659 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CYP39A1Q9NYL5 469 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 IFNKQ9P0W0 207 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 MORF4L1Q9UBU8 362 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 NRBP1Q9UHY1 535 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 CAPN11Q9UMQ6 739 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 PLAGL2Q9UPG8 496 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 KIAA1024Q9UPX6 916 aa3.13□□□□□ -1.91
LINC00393-201ENST00000443621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.13□□□□□ -1.91
LINC00393-201ENST00000443621 TRPM7Q96QT4 1865 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 SSU72P8A0A1W2PR75 194 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 RBM47A0AV96 593 aaKnown RBP3.12□□□□□ -1.91
LINC00393-201ENST00000443621 DCAF8L1A6NGE4 600 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 KCNJ18B7U540 433 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 BIN1O00499 593 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 NFIBO00712 420 aa3.12□□□□□ -1.91
LINC00393-201ENST00000443621 ADAMTS3O15072 1205 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms