RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 TBX10O75333 385 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 DGKIO75912 1065 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 ITGB5P18084 799 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 PDE4AP27815 886 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
TNXB-202ENST00000442721 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
TNXB-202ENST00000442721 TTC22Q5TAA0 569 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 TSHZ1Q6ZSZ6 1077 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 RSPH3Q86UC2 560 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
TNXB-202ENST00000442721 RRP36Q96EU6 259 aaKnown RBP13.69□□□□□ -0.22
TNXB-202ENST00000442721 CDHR1Q96JP9 859 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 SNX27Q96L92 541 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
TNXB-202ENST00000442721 LY9Q9HBG7 655 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 ERAP1Q9NZ08 941 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 TUBE1Q9UJT0 475 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 WDFY4Q6ZS81 3184 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 KIAA1671Q9BY89 1806 aa13.69□□□□□ -0.22
TNXB-202ENST00000442721 DDAH1O94760 285 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 CHMLP26374 656 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.226e-8■■■■■ 32.5
TNXB-202ENST00000442721 NHLH1Q02575 133 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 BTG3Q14201 252 aaPredicted RBP13.68□□□□□ -0.22
TNXB-202ENST00000442721 CLUL1Q15846 466 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 ZNF654Q8IZM8 581 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 DNAJB3Q8WWF6 145 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 P2RX5Q93086 422 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 FBXL18Q96ME1 805 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 POP1Q99575 1024 aaKnown RBP13.68□□□□□ -0.22
TNXB-202ENST00000442721 AGO3Q9H9G7 860 aaKnown RBP13.68□□□□□ -0.22
TNXB-202ENST00000442721 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 UBIAD1Q9Y5Z9 338 aa13.68□□□□□ -0.22
TNXB-202ENST00000442721 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
TNXB-202ENST00000442721 LINC01565O15544 149 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 RPLP2P05387 115 aaKnown RBP13.67□□□□□ -0.22
TNXB-202ENST00000442721 DNAJB1P25685 340 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 MARK3P27448 753 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 CD52P31358 61 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 KIF5BP33176 963 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 MRE11P49959 708 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 MRPS6P82932 125 aaKnown RBP13.67□□□□□ -0.22
TNXB-202ENST00000442721 ADAM15Q13444 863 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 RTN4RL1Q86UN2 441 aaPredicted RBP13.67□□□□□ -0.22
TNXB-202ENST00000442721 CMTR2Q8IYT2 770 aaKnown RBP13.67□□□□□ -0.22
TNXB-202ENST00000442721 SRBD1Q8N5C6 995 aaKnown RBP13.67□□□□□ -0.22
TNXB-202ENST00000442721 CTCFLQ8NI51 663 aaPredicted RBP13.67□□□□□ -0.22
TNXB-202ENST00000442721 EXOC6Q8TAG9 804 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 RUFY2Q8WXA3 655 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 MSLNLQ96KJ4 702 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 PCYT2Q99447 389 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 LZTS2Q9BRK4 669 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 SMARCAD1Q9H4L7 1026 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 ALG13Q9NP73 1137 aaKnown RBP13.67□□□□□ -0.22
TNXB-202ENST00000442721 CD207Q9UJ71 328 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 SQORQ9Y6N5 450 aa13.67□□□□□ -0.22
TNXB-202ENST00000442721 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 SGSM2O43147 1006 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 PLEKHA8P1O95397 391 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 EYA4O95677 639 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 ITGB1P05556 798 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 IRX6P78412 446 aaPredicted RBP13.66□□□□□ -0.22
TNXB-202ENST00000442721 NAALADL2Q58DX5 795 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 NPAS4Q8IUM7 802 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 SPPL3Q8TCT6 385 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 MAP4K1Q92918 833 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 MTA3Q9BTC8 594 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 PSTPIP2Q9H939 334 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 SEC63Q9UGP8 760 aaKnown RBP13.66□□□□□ -0.22
TNXB-202ENST00000442721 MUTYHQ9UIF7 546 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 LOXHD1Q8IVV2 1947 aa13.66□□□□□ -0.22
TNXB-202ENST00000442721 MAFGO15525 162 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 INSRRP14616 1297 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 GNAQP50148 359 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 MTMR1Q13613 665 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 ADGRD2Q7Z7M1 963 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 RNF135Q8IUD6 432 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 GLG1Q92896 1179 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 FTHL17Q9BXU8 183 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 IGFLR1Q9H665 355 aa13.65□□□□□ -0.22
TNXB-202ENST00000442721 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 STXBP3O00186 592 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 SH2B2O14492 632 aaPredicted RBP13.64□□□□□ -0.23
TNXB-202ENST00000442721 ABCB7O75027 752 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 CSPG5O95196 566 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 IGBP1P78318 339 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 UBE2SQ16763 222 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 IER5Q5VY09 327 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 EFHBQ8N7U6 833 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 EDAQ92838 391 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 PPP2R3CQ969Q6 453 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 MFSD14AQ96MC6 490 aa13.64□□□□□ -0.23
TNXB-202ENST00000442721 FAM49AQ9H0Q0 323 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms