RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PTGDRQ13258 359 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 ORC2Q13416 577 aaPredicted RBP18.07■□□□□ 0.48
USP39-205ENST00000442708 FAM47CQ5HY64 1035 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 MIS18BP1Q6P0N0 1132 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 PLPPR4Q7Z2D5 763 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 MIER3Q7Z3K6 550 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 SESTD1Q86VW0 696 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 TOX2Q96NM4 488 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 FTOQ9C0B1 505 aaKnown RBP eCLIP18.07■□□□□ 0.48
USP39-205ENST00000442708 TTC12Q9H892 705 aaPredicted RBP18.07■□□□□ 0.48
USP39-205ENST00000442708 PDLIM7Q9NR12 457 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 SAMM50Q9Y512 469 aa18.07■□□□□ 0.48
USP39-205ENST00000442708 MAFBQ9Y5Q3 323 aaPredicted RBP18.07■□□□□ 0.48
USP39-205ENST00000442708 KAT6AQ92794 2004 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 TRIM43BA6NCK2 446 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 BACH1O14867 736 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 ZNF862O60290 1169 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 HOXC8P31273 242 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 SFNP31947 248 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 JAK3P52333 1124 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 PLCB4Q15147 1175 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 IL17AQ16552 155 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 NCAPH2Q6IBW4 605 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 C7orf31Q8N865 590 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 TRIM43Q96BQ3 446 aaPredicted RBP18.06■□□□□ 0.48
USP39-205ENST00000442708 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 ZNF302Q9NR11 478 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 ERAP1Q9NZ08 941 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 GABBR1Q9UBS5 961 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 GTF2IRD1Q9UHL9 959 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 TCEAL9Q9UHQ7 104 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 ZNF215Q9UL58 517 aaPredicted RBP18.06■□□□□ 0.48
USP39-205ENST00000442708 PCDHA12Q9UN75 941 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 ZDHHC9Q9Y397 364 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 LTBP2Q14767 1821 aa18.06■□□□□ 0.48
USP39-205ENST00000442708 IGSF9BQ9UPX0 1349 aa18.05■□□□□ 0.48
USP39-205ENST00000442708 ZSCAN22P10073 491 aaPredicted RBP18.05■□□□□ 0.48
USP39-205ENST00000442708 SYN1P17600 705 aa18.05■□□□□ 0.48
USP39-205ENST00000442708 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
USP39-205ENST00000442708 PDXDC2PQ6P474 469 aa18.05■□□□□ 0.48
USP39-205ENST00000442708 RDM1Q8NG50 284 aa18.05■□□□□ 0.48
USP39-205ENST00000442708 SEZ6LQ9BYH1 1024 aa18.05■□□□□ 0.48
USP39-205ENST00000442708 SETD4Q9NVD3 440 aa18.05■□□□□ 0.48
USP39-205ENST00000442708 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
USP39-205ENST00000442708 MROH7Q68CQ1 1323 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 POTEMA6NI47 508 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 DCDC2CA8MYV0 355 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 RBAK-RBAKDNI3L0D1 243 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 CLTBP09497 229 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 CYP2C9P11712 490 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 ITGB8P26012 769 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 TECP42680 631 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 ADAM17P78536 824 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 FAM160B1Q5W0V3 765 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 ZBTB10Q96DT7 871 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 WRAP73Q9P2S5 460 aaPredicted RBP18.04■□□□□ 0.48
USP39-205ENST00000442708 TBX21Q9UL17 535 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 CEP290O15078 2479 aa18.04■□□□□ 0.48
USP39-205ENST00000442708 STBD1O95210 358 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 F13A1P00488 732 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 ATP2C1P98194 919 aaPredicted RBP18.03■□□□□ 0.48
USP39-205ENST00000442708 PTGISQ16647 500 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 MARCH8Q5T0T0 291 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 BANK1Q8NDB2 785 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 LMBR1Q8WVP7 490 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 TRAPPC12Q8WVT3 735 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 DHX38Q92620 1227 aaKnown RBP18.03■□□□□ 0.48
USP39-205ENST00000442708 WNT8BQ93098 351 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 ZSCAN16Q9H4T2 348 aaPredicted RBP18.03■□□□□ 0.48
USP39-205ENST00000442708 RGL1Q9NZL6 768 aa18.03■□□□□ 0.48
USP39-205ENST00000442708 UMODL1Q5DID0 1318 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 POTEB3A0JP26 581 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 C17orf102A2RUQ5 167 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 ZBTB42B2RXF5 422 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 H0YGN5 161 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 TLR3O15455 904 aaKnown RBP18.02■□□□□ 0.48
USP39-205ENST00000442708 TREHO43280 583 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 INSRRP14616 1297 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 DDIT3P35638 169 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 SLC26A2P50443 739 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 PRKCEQ02156 737 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 EPHA7Q15375 998 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 SF3A1Q15459 793 aaKnown RBP18.02■□□□□ 0.48
USP39-205ENST00000442708 GRIK4Q16099 956 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 POTEBQ6S5H4 581 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 TRMT1LQ7Z2T5 733 aaKnown RBP18.02■□□□□ 0.48
USP39-205ENST00000442708 ATP8B4Q8TF62 1192 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 DYDC2Q96IM9 177 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 PRDM5Q9NQX1 630 aaPredicted RBP18.02■□□□□ 0.48
USP39-205ENST00000442708 TMEM39AQ9NV64 488 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 TRPC6Q9Y210 931 aa18.02■□□□□ 0.48
USP39-205ENST00000442708 TMEM150BA6NC51 233 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 KIAA0355O15063 1070 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 BRD1O95696 1058 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 PRPHP41219 470 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP39-205ENST00000442708 PPFIA1Q13136 1202 aa18.01■□□□□ 0.47
USP39-205ENST00000442708 CTTNQ14247 550 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms