RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 BECN1Q14457 450 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 NBR1Q14596 966 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 PTGISQ16647 500 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 RILPL1Q5EBL4 403 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 PDXDC2PQ6P474 469 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 B3GNT9Q6UX72 402 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 FERMT3Q86UX7 667 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 CCDC60Q8IWA6 550 aaPredicted RBP13.9□□□□□ -0.18
USP1-203ENST00000442679 RDM1Q8NG50 284 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 AFAP1L1Q8TED9 768 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 TRIM43Q96BQ3 446 aaPredicted RBP13.9□□□□□ -0.18
USP1-203ENST00000442679 MTMR9Q96QG7 549 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 SETD4Q9NVD3 440 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 VAV3Q9UKW4 847 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 NOD1Q9Y239 953 aa13.9□□□□□ -0.18
USP1-203ENST00000442679 DOCK5Q9H7D0 1870 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 KIAA0355O15063 1070 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 STX6O43752 255 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 GNAT1P11488 350 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 TXKP42681 527 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 SLC26A2P50443 739 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 ZNF200P98182 395 aaPredicted RBP13.89□□□□□ -0.19
USP1-203ENST00000442679 PPP2R5CQ13362 524 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 BRAPQ7Z569 592 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
USP1-203ENST00000442679 TTC12Q9H892 705 aaPredicted RBP13.89□□□□□ -0.19
USP1-203ENST00000442679 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 MTMR6Q9Y217 621 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
USP1-203ENST00000442679 MAFBQ9Y5Q3 323 aaPredicted RBP13.89□□□□□ -0.19
USP1-203ENST00000442679 POTEB3A0JP26 581 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 EML1O00423 815 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 CYP2C9P11712 490 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 RAG1P15918 1043 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 ATP4AP20648 1035 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 PPFIA1Q13136 1202 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 HIC1Q14526 733 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 NCAPH2Q6IBW4 605 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 POTEBQ6S5H4 581 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 CKAP2LQ8IYA6 745 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 C4orf32Q8N8J7 132 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 TRPC6Q9Y210 931 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 NRCAMQ92823 1304 aa13.88□□□□□ -0.19
USP1-203ENST00000442679 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 TIMP1P01033 207 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 OR52Z1P0C646 297 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
USP1-203ENST00000442679 INSRRP14616 1297 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 HOXC8P31273 242 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 SPIRE1Q08AE8 756 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 RESTQ13127 1097 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 PTGDRQ13258 359 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 EPHA7Q15375 998 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 GRIK4Q16099 956 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 ATP8B4Q8TF62 1192 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 LMBR1Q8WVP7 490 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 ATP6V0A1Q93050 837 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 CTAGE1Q96RT6 745 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 LBHD1Q9BQE6 289 aaPredicted RBP13.87□□□□□ -0.19
USP1-203ENST00000442679 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
USP1-203ENST00000442679 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.87□□□□□ -0.19
USP1-203ENST00000442679 ALPK3Q96L96 1907 aa13.87□□□□□ -0.19
USP1-203ENST00000442679 RRN3P2A6NIE6 340 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 TREHO43280 583 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 ZNF862O60290 1169 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 HBP1O60381 514 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 ITGB8P26012 769 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 CYP2C18P33260 490 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 TECP42680 631 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 IGBP1P78318 339 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 PTK7Q13308 1070 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 UGCGQ16739 394 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 PRPF38BQ5VTL8 546 aaKnown RBP13.86□□□□□ -0.19
USP1-203ENST00000442679 TRMT1LQ7Z2T5 733 aaKnown RBP13.86□□□□□ -0.19
USP1-203ENST00000442679 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 BADQ92934 168 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 ZSCAN16Q9H4T2 348 aaPredicted RBP13.86□□□□□ -0.19
USP1-203ENST00000442679 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 IGSF9BQ9UPX0 1349 aa13.86□□□□□ -0.19
USP1-203ENST00000442679 LAD1O00515 517 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 P4HBP07237 508 aaKnown RBP13.85□□□□□ -0.19
USP1-203ENST00000442679 MAGEA10P43363 369 aaPredicted RBP13.85□□□□□ -0.19
USP1-203ENST00000442679 QARSP47897 775 aaKnown RBP13.85□□□□□ -0.19
USP1-203ENST00000442679 PSMC5P62195 406 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 ADAM17P78536 824 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 MDM2Q00987 491 aaPredicted RBP13.85□□□□□ -0.19
USP1-203ENST00000442679 PRKCEQ02156 737 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 BFSP2Q13515 415 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 TMEM266Q2M3C6 531 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 ZNF484Q5JVG2 852 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms