RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RMDN3Q96TC7 470 aa14.58□□□□□ -0.08
CPSF4-206ENST00000441580 RUSC1Q9BVN2 902 aa14.58□□□□□ -0.08
CPSF4-206ENST00000441580 ZHX3Q9H4I2 956 aa14.58□□□□□ -0.08
CPSF4-206ENST00000441580 TRMT1Q9NXH9 659 aaKnown RBP14.58□□□□□ -0.08
CPSF4-206ENST00000441580 HOXC10Q9NYD6 342 aa14.58□□□□□ -0.08
CPSF4-206ENST00000441580 PPP2R2CQ9Y2T4 447 aa14.58□□□□□ -0.08
CPSF4-206ENST00000441580 PHLPP2Q6ZVD8 1323 aa14.58□□□□□ -0.08
CPSF4-206ENST00000441580 NPHP3-ACAD11A0A0J9YXS1 232 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 ARHGEF35A5YM69 484 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 CALUO43852 315 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 USP2O75604 605 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 SLITRK3O94933 977 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 LYPLA2O95372 231 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 P4HBP07237 508 aaKnown RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 GUCY2CP25092 1073 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 FXR1P51114 621 aaKnown RBP eCLIP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 PSMC6P62333 389 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 PPP2R3AQ06190 1150 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 TBC1D8BQ0IIM8 1120 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 TSR1Q2NL82 804 aaKnown RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 CCDC40Q4G0X9 1142 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 VWA3BQ502W6 1294 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 MIIPQ5JXC2 388 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 PRAMEF18Q5VWM3 479 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 C9orf131Q5VYM1 1079 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 RINT1Q6NUQ1 792 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 CYP26C1Q6V0L0 522 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 EPM2AIP1Q7L775 607 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 TPH2Q8IWU9 490 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 PROCA1Q8NCQ7 364 aaPredicted RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 CHST13Q8NET6 341 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 ZC3H15Q8WU90 426 aaKnown RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 SCFD1Q8WVM8 642 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 DNAJC7Q99615 494 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 TIPINQ9BVW5 301 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 KCTD10Q9H3F6 313 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 ZSWIM4Q9H7M6 989 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 RGL1Q9NZL6 768 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 FBXO40Q9UH90 709 aa14.57□□□□□ -0.08
CPSF4-206ENST00000441580 DBR1Q9UK59 544 aaKnown RBP14.57□□□□□ -0.08
CPSF4-206ENST00000441580 WDR64B1ANS9 1081 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 ADM5C9JUS6 153 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 DYNC1I1O14576 645 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 SLC16A3O15427 465 aaKnown RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 MAFGO15525 162 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 TRIM21P19474 475 aaKnown RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 KRT9P35527 623 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 ZNF131P52739 623 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 MRPS9P82933 396 aaKnown RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 ALCAMQ13740 583 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 LRRC41Q15345 812 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 SYCP1Q15431 976 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 DPY19L2Q6NUT2 758 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 NSUN6Q8TEA1 469 aaKnown RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 CCDC43Q96MW1 224 aaKnown RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 TAAR1Q96RJ0 339 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 TTYH3Q9C0H2 523 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 NDST4Q9H3R1 872 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 PARVGQ9HBI0 331 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 TYW1Q9NV66 732 aaKnown RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 FAM184BQ9ULE4 1060 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 CAPN11Q9UMQ6 739 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 TRAF3IP3Q9Y228 551 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 LUC7L2Q9Y383 392 aaKnown RBP14.56□□□□□ -0.08
CPSF4-206ENST00000441580 PFASO15067 1338 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 LCTP09848 1927 aa14.56□□□□□ -0.08
CPSF4-206ENST00000441580 LRRC37A2A6NM11 1700 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 TRAF5O00463 557 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 PDXKO00764 312 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 CETN3O15182 167 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 DKC1O60832 514 aaKnown RBP eCLIP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 YBX3P16989 372 aaKnown RBP eCLIP14.55□□□□□ -0.085e-8■□□□□ 10.9
CPSF4-206ENST00000441580 RPL13P26373 211 aaKnown RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 COPB2P35606 906 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 ZBED6P86452 979 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 PPATQ06203 517 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 RAD51AP2Q09MP3 1159 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 ITGB3BPQ13352 177 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 BAATQ14032 418 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 TMEM132BQ14DG7 1078 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 NFIL3Q16649 462 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 KNOP1Q1ED39 458 aaKnown RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 C1orf186Q6ZWK4 172 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 NELFCDQ8IXH7 590 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 GLIS3Q8NEA6 775 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 ZNF397Q8NF99 534 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 OR8K1Q8NGG5 319 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 WNK4Q96J92 1243 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 INPP4AQ96PE3 977 aaPredicted RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 MRPL44Q9H9J2 332 aaKnown RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 ZNHIT6Q9NWK9 470 aaKnown RBP14.55□□□□□ -0.08
CPSF4-206ENST00000441580 TBC1D7Q9P0N9 293 aa14.55□□□□□ -0.08
CPSF4-206ENST00000441580 POLR2AP24928 1970 aaKnown RBP14.54□□□□□ -0.08
CPSF4-206ENST00000441580 A0A0G2JLL6 359 aaPredicted RBP14.54□□□□□ -0.08
CPSF4-206ENST00000441580 SPDYE5A6NIY4 337 aa14.54□□□□□ -0.08
CPSF4-206ENST00000441580 SOWAHDA6NJG2 315 aa14.54□□□□□ -0.08
CPSF4-206ENST00000441580 DDX39AO00148 427 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms