RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 THPOP40225 353 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 FOSBP53539 338 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 GPNMBQ14956 572 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 GRIK4Q16099 956 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 ZNF746Q6NUN9 644 aaPredicted RBP26.78■■□□□ 1.88
VARS-217ENST00000440048 MOXD1Q6UVY6 613 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 MBOAT7Q96N66 472 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 TBC1D32Q96NH3 1257 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 LLPHQ9BRT6 129 aaKnown RBP26.78■■□□□ 1.88
VARS-217ENST00000440048 MTIF3Q9H2K0 278 aaKnown RBP26.78■■□□□ 1.88
VARS-217ENST00000440048 MTMR10Q9NXD2 777 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 WDR81Q562E7 1941 aa26.78■■□□□ 1.88
VARS-217ENST00000440048 MYH9P35579 1960 aaKnown RBP26.78■■□□□ 1.88
VARS-217ENST00000440048 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.77■■□□□ 1.88
VARS-217ENST00000440048 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.77■■□□□ 1.88
VARS-217ENST00000440048 BACH1O14867 736 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 KRT2P35908 639 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 KRT76Q01546 638 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 PLCB4Q15147 1175 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 MIS18BP1Q6P0N0 1132 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 PIK3AP1Q6ZUJ8 805 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 Q7L0L9 218 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 SLC5A5Q92911 643 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 FTOQ9C0B1 505 aaKnown RBP eCLIP26.77■■□□□ 1.88
VARS-217ENST00000440048 TCEAL9Q9UHQ7 104 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 GTF3C3Q9Y5Q9 886 aa26.77■■□□□ 1.88
VARS-217ENST00000440048 PARNO95453 639 aaKnown RBP26.76■■□□□ 1.87
VARS-217ENST00000440048 NR5A1Q13285 461 aa26.76■■□□□ 1.87
VARS-217ENST00000440048 LETM2Q2VYF4 491 aa26.76■■□□□ 1.87
VARS-217ENST00000440048 EARS2Q5JPH6 523 aaKnown RBP26.76■■□□□ 1.87
VARS-217ENST00000440048 FAM160B1Q5W0V3 765 aa26.76■■□□□ 1.87
VARS-217ENST00000440048 CCDC60Q8IWA6 550 aaPredicted RBP26.76■■□□□ 1.87
VARS-217ENST00000440048 SMAP1Q8IYB5 467 aaPredicted RBP26.76■■□□□ 1.87
VARS-217ENST00000440048 RIT2Q99578 217 aa26.76■■□□□ 1.87
VARS-217ENST00000440048 BRMS1Q9HCU9 246 aa26.76■■□□□ 1.87
VARS-217ENST00000440048 TRPC6Q9Y210 931 aa26.76■■□□□ 1.87
VARS-217ENST00000440048 COL6A3P12111 3177 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 ST18O60284 1047 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 NBNO60934 754 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 MMP1P03956 469 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 INSRRP14616 1297 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 SLC26A2P50443 739 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 TRIM29Q14134 588 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 MARCH8Q5T0T0 291 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 ZNF697Q5TEC3 545 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 KRT40Q6A162 431 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 SWSAP1Q6NVH7 229 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 NEK8Q86SG6 692 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 TNFRSF25Q93038 417 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 GJA10Q969M2 543 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 ZNF302Q9NR11 478 aa26.75■■□□□ 1.87
VARS-217ENST00000440048 DDX25Q9UHL0 483 aaKnown RBP26.75■■□□□ 1.87
VARS-217ENST00000440048 MBLAC1A4D2B0 266 aaPredicted RBP26.74■■□□□ 1.87
VARS-217ENST00000440048 FAM205CA6NFA0 338 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 GAS7O60861 476 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 CXCL10P02778 98 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 ACTN1P12814 892 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 IGBP1P78318 339 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 MBTPS1Q14703 1052 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 LRCH2Q5VUJ6 765 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 PDXDC2PQ6P474 469 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 RUFY4Q6ZNE9 571 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 TNPO1Q92973 898 aaKnown RBP26.74■■□□□ 1.87
VARS-217ENST00000440048 TEKT3Q9BXF9 490 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 TUBE1Q9UJT0 475 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 PCDHA10Q9Y5I2 948 aa26.74■■□□□ 1.87
VARS-217ENST00000440048 POTEB3A0JP26 581 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 RRN3P2A6NIE6 340 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 ZBBXA8MT70 800 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 GRXCR1A8MXD5 290 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 RSPH10B2B2RC85 870 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 SLC37A4O43826 429 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 CAND2O75155 1236 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 PSMD10O75832 226 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 PSAPP07602 524 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 RSPH10BP0C881 870 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 POTEBQ6S5H4 581 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 IL27Q8NEV9 243 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 ETNPPLQ8TBG4 499 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 STXBP5LQ9Y2K9 1186 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 SLC4A7Q9Y6M7 1214 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 MYO9BQ13459 2157 aa26.73■■□□□ 1.87
VARS-217ENST00000440048 WDR64B1ANS9 1081 aa26.72■■□□□ 1.87
VARS-217ENST00000440048 BTBD18B2RXH4 712 aa26.72■■□□□ 1.87
VARS-217ENST00000440048 RBAK-RBAKDNI3L0D1 243 aa26.72■■□□□ 1.87
VARS-217ENST00000440048 PPP4R3AQ6IN85 833 aa26.72■■□□□ 1.87
VARS-217ENST00000440048 TAF2Q6P1X5 1199 aa26.72■■□□□ 1.87
VARS-217ENST00000440048 DIS3L2Q8IYB7 885 aaKnown RBP26.72■■□□□ 1.87
VARS-217ENST00000440048 UNC45AQ9H3U1 944 aa26.72■■□□□ 1.87
VARS-217ENST00000440048 SAMM50Q9Y512 469 aa26.72■■□□□ 1.87
VARS-217ENST00000440048 MAFBQ9Y5Q3 323 aaPredicted RBP26.72■■□□□ 1.87
VARS-217ENST00000440048 TMEM265A0A087WTH1 108 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 CTSHP09668 335 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 GCFC2P16383 781 aaKnown RBP26.71■■□□□ 1.87
VARS-217ENST00000440048 ATP4AP20648 1035 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 HMGN5P82970 282 aaKnown RBP26.71■■□□□ 1.87
VARS-217ENST00000440048 GUCY1B3Q02153 619 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 ATP8B4Q8TF62 1192 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 TRAPPC12Q8WVT3 735 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 ZBTB10Q96DT7 871 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms