RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 EPB41L5Q9HCM4 733 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 GSTA1P08263 222 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 GSTA2P09210 222 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 MCTP2Q6DN12 878 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 NLRX1Q86UT6 975 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 DHX36Q9H2U1 1008 aaKnown RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 ADGRG1Q9Y653 693 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 RGS16O15492 202 aaPredicted RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 CASP1P29466 404 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 ADCY1Q08828 1119 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 SFSWAPQ12872 951 aaKnown RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 SLC12A1Q13621 1099 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 RFWD2Q8NHY2 731 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 APPL1Q9UKG1 709 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 TCF3P15923 654 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 ADCY8P40145 1251 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 MAGEA9P43362 315 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 ITFG2Q969R8 447 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 DONSONQ9NYP3 566 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 SP100P23497 879 aaPredicted RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 NAA35Q5VZE5 725 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 RASGRP4Q8TDF6 673 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 P2RX5Q93086 422 aa12.5□□□□□ -0.41
CCBE1-202ENST00000439986 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 MRPL46Q9H2W6 279 aaKnown RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 NHEJ1Q9H9Q4 299 aaPredicted RBP12.5□□□□□ -0.41
CCBE1-202ENST00000439986 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 E2F6O75461 281 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 KCNJ6P48051 423 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 ZBED6P86452 979 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 SHC4Q6S5L8 630 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 TNIP3Q96KP6 325 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 UBE2OQ9C0C9 1292 aaKnown RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 VTI1BQ9UEU0 232 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 AMFRQ9UKV5 643 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 GNA14O95837 355 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 GPR162Q16538 588 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 TCP11X2Q5H9J9 407 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 TMTC4Q5T4D3 741 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 SH3KBP1Q96B97 665 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 PANK4Q9NVE7 773 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 FNDC3AQ9Y2H6 1198 aaKnown RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 FIS1Q9Y3D6 152 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 TAF6LQ9Y6J9 622 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 APOL1O14791 398 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 AP5Z1O43299 807 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 YY1P25490 414 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 SCRN3Q0VDG4 424 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 TUBB1Q9H4B7 451 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 TEX33O43247 280 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 SLC26A4O43511 780 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 ANGPTL8Q6UXH0 198 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 ST13P4Q8IZP2 240 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 GABPB2Q8TAK5 448 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 FUCA2Q9BTY2 467 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 MAGED1Q9Y5V3 778 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 EIF3CLB5ME19 914 aaKnown RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 FOXN1O15353 648 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 HSPA1AP0DMV8 641 aaKnown RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 HSPA1BP0DMV9 641 aaKnown RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 STX2P32856 288 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 PIK3CAP42336 1068 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 NNTQ13423 1086 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 TBC1D10CQ8IV04 446 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 RYBPQ8N488 228 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 EIF3CQ99613 913 aaKnown RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
CCBE1-202ENST00000439986 ABHD10Q9NUJ1 306 aa12.49□□□□□ -0.41
CCBE1-202ENST00000439986 SRGAP2O75044 1071 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 MOCS3O95396 460 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 OTUD6AQ7L8S5 288 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 PLEKHG1Q9ULL1 1385 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 UBN2Q6ZU65 1347 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 ZBTB24O43167 697 aaPredicted RBP12.48□□□□□ -0.41
CCBE1-202ENST00000439986 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 LRPAP1P30533 357 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 MTF1Q14872 753 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 RCN1Q15293 331 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 TRIML2Q8N7C3 387 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 PARD3BQ8TEW8 1205 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
CCBE1-202ENST00000439986 DKC1O60832 514 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCBE1-202ENST00000439986 XRCC5P13010 732 aaKnown RBP12.48□□□□□ -0.41
CCBE1-202ENST00000439986 P4HA1P13674 534 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 SLC7A5Q01650 507 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 NT5C3AQ9H0P0 336 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms