RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MYH4Q9Y623 1939 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 SSU72P8A0A1W2PR75 194 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 TRAF5O00463 557 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 SART1O43290 800 aaKnown RBP14.85□□□□□ -0.03
PCNX3-202ENST00000439247 MYBP10242 640 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 NAPAP54920 295 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 PCDHGC5Q9Y5F6 944 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 DLEC1Q9Y238 1755 aa14.85□□□□□ -0.03
PCNX3-202ENST00000439247 RBAK-RBAKDNI3L0D1 243 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 SERPING1P05155 500 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 TNNC1P63316 161 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 FLAD1Q8NFF5 587 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 FAM84BQ96KN1 310 aaPredicted RBP14.84□□□□□ -0.03
PCNX3-202ENST00000439247 VEZTQ9HBM0 779 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 TSKSQ9UJT2 592 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 ATP6V0A2Q9Y487 856 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 C21orf2O43822 256 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 COPB2P35606 906 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 PPP2R2AP63151 447 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 RPS6KA1Q15418 735 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 ADAT2Q7Z6V5 191 aaKnown RBP14.84□□□□□ -0.03
PCNX3-202ENST00000439247 ANKS1AQ92625 1134 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 DDX12PQ92771 950 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 CALML4Q96GE6 196 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 SGSM3Q96HU1 749 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 TMEM59LQ9UK28 342 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 A0A1B0GUL6 1792 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 ZNF804BA4D1E1 1349 aa14.84□□□□□ -0.03
PCNX3-202ENST00000439247 SMCO2A6NFE2 343 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 F8W031 263 aaPredicted RBP14.83□□□□□ -0.03
PCNX3-202ENST00000439247 TTI1O43156 1089 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 PRPHP41219 470 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 AMPD3Q01432 767 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 KLHL30Q0D2K2 578 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 SLC18A3Q16572 532 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 ECM1Q16610 540 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 CRY2Q49AN0 593 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 CPLX4Q7Z7G2 160 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 CACNA2D3Q8IZS8 1091 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 TAF4BQ92750 862 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 HVCN1Q96D96 273 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 CUEDC2Q9H467 287 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 SLC24A3Q9HC58 644 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 SH3GLB2Q9NR46 395 aa14.83□□□□□ -0.03
PCNX3-202ENST00000439247 SMIM23A6NLE4 172 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 TMCO5BA8MYB1 307 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 SLC37A4O43826 429 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 PLCB4Q15147 1175 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 KRT71Q3SY84 523 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 UBAP2Q5T6F2 1119 aaKnown RBP14.83□□□□□ -0.04
PCNX3-202ENST00000439247 UNC13DQ70J99 1090 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 LARP4BQ92615 738 aaKnown RBP14.83□□□□□ -0.04
PCNX3-202ENST00000439247 GPR101Q96P66 508 aaPredicted RBP14.83□□□□□ -0.04
PCNX3-202ENST00000439247 MTFR1LQ9H019 292 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 RNF14Q9UBS8 474 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 GGT7Q9UJ14 662 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 NR2E1Q9Y466 385 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 MYH7BA7E2Y1 1941 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 CDC25CP30307 473 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 METTL13Q8N6R0 699 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.04
PCNX3-202ENST00000439247 CEP72Q9P209 647 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 BAIAP2L1Q9UHR4 511 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 PNMA2Q9UL42 364 aa14.83□□□□□ -0.04
PCNX3-202ENST00000439247 ANKRD31Q8N7Z5 1873 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 TDP2O95551 362 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 PTK2Q05397 1052 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 GRM4Q14833 912 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 NONOQ15233 471 aaKnown RBP eCLIP14.82□□□□□ -0.04
PCNX3-202ENST00000439247 TATDN2Q93075 761 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 TRIM51Q9BSJ1 452 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 NOC2LQ9Y3T9 749 aaKnown RBP14.82□□□□□ -0.04
PCNX3-202ENST00000439247 NPHP3-ACAD11A0A0J9YXS1 232 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 KIF4AO95239 1232 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 DHX9Q08211 1270 aaKnown RBP14.82□□□□□ -0.04
PCNX3-202ENST00000439247 GRAPQ13588 217 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 HIBCHQ6NVY1 386 aaPredicted RBP14.82□□□□□ -0.04
PCNX3-202ENST00000439247 USP17L2Q6R6M4 530 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 NEK8Q86SG6 692 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 GUF1Q8N442 669 aaKnown RBP14.82□□□□□ -0.04
PCNX3-202ENST00000439247 ARFGAP2Q8N6H7 521 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 GRAPLQ8TC17 118 aaPredicted RBP14.82□□□□□ -0.04
PCNX3-202ENST00000439247 AK8Q96MA6 479 aa14.82□□□□□ -0.04
PCNX3-202ENST00000439247 CRNKL1Q9BZJ0 848 aaKnown RBP14.82□□□□□ -0.04
PCNX3-202ENST00000439247 SHBGP04278 402 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 CLNS1AP54105 237 aaKnown RBP14.81□□□□□ -0.04
PCNX3-202ENST00000439247 PPP1R7Q15435 360 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 TXNRD3Q86VQ6 643 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 SCFD2Q8WU76 684 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 CCT6BQ92526 530 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 CDK5RAP3Q96JB5 506 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 ACTR5Q9H9F9 607 aaPredicted RBP14.81□□□□□ -0.04
PCNX3-202ENST00000439247 ATP8A1Q9Y2Q0 1164 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 COL4A3BPQ9Y5P4 624 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 KLRF2D3W0D1 207 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 KRIT1O00522 736 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 CAND2O75155 1236 aa14.81□□□□□ -0.04
PCNX3-202ENST00000439247 DRD4P21917 467 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms