RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 XRCC4Q13426 336 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 RAPGEF1Q13905 1077 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 KRT12Q99456 494 aa17.2■□□□□ 0.34
DHFR-201ENST00000439211 RASSF7Q02833 373 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 ZRSR2Q15696 482 aaKnown RBP17.19■□□□□ 0.34
DHFR-201ENST00000439211 TBC1D25Q3MII6 688 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
DHFR-201ENST00000439211 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
DHFR-201ENST00000439211 COA7Q96BR5 231 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 LRRC45Q96CN5 670 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 CAPN11Q9UMQ6 739 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 EPB41P11171 864 aaKnown RBP17.19■□□□□ 0.34
DHFR-201ENST00000439211 CCND1P24385 295 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 EIF4A3P38919 411 aaKnown RBP17.19■□□□□ 0.34
DHFR-201ENST00000439211 NFRKBQ6P4R8 1299 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 TMEM154Q6P9G4 183 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 TXNRD3Q86VQ6 643 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 NAF1Q96HR8 494 aaKnown RBP17.19■□□□□ 0.34
DHFR-201ENST00000439211 FGD4Q96M96 766 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 PANK4Q9NVE7 773 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 DLGAP2Q9P1A6 1054 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 DYNC1I2Q13409 638 aaKnown RBP17.19■□□□□ 0.34
DHFR-201ENST00000439211 PCDHGC5Q9Y5F6 944 aa17.19■□□□□ 0.34
DHFR-201ENST00000439211 MGRN1O60291 552 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 PLEKP08567 350 aaPredicted RBP17.18■□□□□ 0.34
DHFR-201ENST00000439211 PBX1P40424 430 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 QPCTQ16769 361 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 ZNF804AQ7Z570 1209 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 PRCCQ92733 491 aaPredicted RBP17.18■□□□□ 0.34
DHFR-201ENST00000439211 GORASP1Q9BQQ3 440 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
DHFR-201ENST00000439211 CFAP73A6NFT4 308 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 MAGOHP61326 146 aaKnown RBP17.18■□□□□ 0.34
DHFR-201ENST00000439211 ZNF365Q70YC5 407 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 TRIM42Q8IWZ5 723 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 MAGOHBQ96A72 148 aaKnown RBP17.18■□□□□ 0.34
DHFR-201ENST00000439211 RHBDL2Q9NX52 303 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 LMCD1Q9NZU5 365 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 BCL9O00512 1426 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 H0Y3Z8 333 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 DESP17661 470 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 PPP2R2AP63151 447 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 SLC5A9Q2M3M2 681 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 ANKRD20A2Q5SQ80 823 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 ANKRD20A1Q5TYW2 823 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 ANKRD20A3Q5VUR7 823 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 ZSCAN29Q8IWY8 852 aaPredicted RBP17.18■□□□□ 0.34
DHFR-201ENST00000439211 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 TAF1DQ9H5J8 278 aaPredicted RBP17.18■□□□□ 0.34
DHFR-201ENST00000439211 KANSL2Q9H9L4 492 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 TMEM260Q9NX78 707 aa17.18■□□□□ 0.34
DHFR-201ENST00000439211 CNGA1P29973 690 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
DHFR-201ENST00000439211 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
DHFR-201ENST00000439211 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
DHFR-201ENST00000439211 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
DHFR-201ENST00000439211 POTEMA6NI47 508 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 UFL1O94874 794 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 ARL10Q8N8L6 244 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 NDST4Q9H3R1 872 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 SCOCQ9UIL1 159 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 ZNF233A6NK53 670 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 BTDP43251 543 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 KIF11P52732 1056 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 SPRED3Q2MJR0 410 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 PAPD7Q5XG87 772 aaKnown RBP17.17■□□□□ 0.34
DHFR-201ENST00000439211 MMADHCQ9H3L0 296 aaPredicted RBP17.17■□□□□ 0.34
DHFR-201ENST00000439211 GGA2Q9UJY4 613 aa17.17■□□□□ 0.34
DHFR-201ENST00000439211 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
DHFR-201ENST00000439211 RAPGEF5Q92565 580 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 ABTB1Q969K4 478 aaPredicted RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 CHMP6Q96FZ7 201 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 SEPT11Q9NVA2 429 aaKnown RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 BARHL2Q9NY43 387 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 DPPA5A6NC42 116 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 LRRC10BA6NIK2 292 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 TPD52L2O43399 206 aaKnown RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 NCK2O43639 380 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 BLMHQ13867 455 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 CRELD2Q6UXH1 353 aaPredicted RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 NOX5Q96PH1 765 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 PCDHA13Q9Y5I0 950 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 TNS2Q63HR2 1409 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 A0A1W2PQC6 194 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 ANO9A1A5B4 782 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 SPDYE3A6NKU9 549 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 RIMBP2O15034 1052 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 DNAJC8O75937 253 aaPredicted RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 HERVK_113P62684 666 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 TNNC1P63316 161 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 HERC4Q5GLZ8 1057 aaPredicted RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 C12orf60Q5U649 245 aa17.16■□□□□ 0.34
DHFR-201ENST00000439211 MARCH10Q8NA82 808 aaPredicted RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 GIMAP8Q8ND71 665 aaPredicted RBP17.16■□□□□ 0.34
DHFR-201ENST00000439211 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms