RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 TBC1D10CQ8IV04 446 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 DCDC2CA8MYV0 355 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 IFNAR1P17181 557 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 HHIPL2Q6UWX4 724 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 CYFIP1Q7L576 1253 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 RASEFQ8IZ41 740 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 NDUFAF2Q8N183 169 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 MB21D1Q8N884 522 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 SCYL1Q96KG9 808 aa13.13□□□□□ -0.31
NEK1-201ENST00000439128 IQGAP3Q86VI3 1631 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 GGPS1O95749 300 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEK1-201ENST00000439128 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 TTC1Q99614 292 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 TRPC7Q9HCX4 862 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 RIC8AQ9NPQ8 531 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEK1-201ENST00000439128 ATP11BQ9Y2G3 1177 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 V9GYY5 206 aaPredicted RBP13.12□□□□□ -0.31
NEK1-201ENST00000439128 BUB1O43683 1085 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 TADA2AO75478 443 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 PLCG1P19174 1290 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 MXI1P50539 228 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 ACCSLQ4AC99 568 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 FAM81BQ96LP2 452 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 TRIM56Q9BRZ2 755 aaKnown RBP13.12□□□□□ -0.31
NEK1-201ENST00000439128 SYNDIG1Q9H7V2 258 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
NEK1-201ENST00000439128 CD163L1Q9NR16 1453 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 CTNND1O60716 968 aaKnown RBP13.12□□□□□ -0.31
NEK1-201ENST00000439128 NTSR2O95665 410 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 GBP1P32455 592 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 LIFRP42702 1097 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 IER5Q5VY09 327 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 MAD1L1Q9Y6D9 718 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 MYO1FO00160 1098 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 SLC16A4O15374 487 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 STAT5BP51692 787 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEK1-201ENST00000439128 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 CPA4Q9UI42 421 aa13.12□□□□□ -0.31
NEK1-201ENST00000439128 ADCY8P40145 1251 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 CYP27A1Q02318 531 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 TMEM62Q0P6H9 643 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 DNAJC24Q6P3W2 148 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 EFCAB13Q8IY85 973 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 FEZ2Q9UHY8 353 aaPredicted RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 FLT1P17948 1338 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 CCDC85CA6NKD9 419 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 KRT15P19012 456 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 NDUFA8P51970 172 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 ZNF394Q53GI3 561 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 PGBD4Q96DM1 585 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 CPT1AP50416 773 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 GLYCTKQ8IVS8 523 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 PPP4R1Q8TF05 950 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 NSUN4Q96CB9 384 aaKnown RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 A0A087WWV3 80 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 P4HBP07237 508 aaKnown RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 CDO1Q16878 200 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 ANKS4BQ8N8V4 417 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 NSUN7Q8NE18 718 aaKnown RBP13.11□□□□□ -0.31
NEK1-201ENST00000439128 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 ANGPTL3Q9Y5C1 460 aa13.11□□□□□ -0.31
NEK1-201ENST00000439128 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 RPS6KA5O75582 802 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 ADKP55263 362 aaKnown RBP13.1□□□□□ -0.31
NEK1-201ENST00000439128 MESDQ14696 234 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 GRM4Q14833 912 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 PPP1R18Q6NYC8 613 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 CAPN12Q6ZSI9 719 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 ADAT2Q7Z6V5 191 aaKnown RBP13.1□□□□□ -0.31
NEK1-201ENST00000439128 GRK7Q8WTQ7 553 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 ZNF148Q9UQR1 794 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
NEK1-201ENST00000439128 PCDHB7Q9Y5E2 793 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 ZWINTO95229 277 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 ALDH1A1P00352 501 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 PSMC5P62195 406 aa13.1□□□□□ -0.31
NEK1-201ENST00000439128 MYLK4Q86YV6 388 aaPredicted RBP13.1□□□□□ -0.31
NEK1-201ENST00000439128 KDM6AO15550 1401 aaPredicted RBP13.1□□□□□ -0.31
NEK1-201ENST00000439128 PRPSAP2O60256 369 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms