RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PLCB4Q15147 1175 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 LETM2Q2VYF4 491 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 ZNF618Q5T7W0 954 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 B3GNT9Q6UX72 402 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 RUFY4Q6ZNE9 571 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 DIS3L2Q8IYB7 885 aaKnown RBP15.05■□□□□ -0
LINC00399-201ENST00000439008 TRAPPC12Q8WVT3 735 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 GLG1Q92896 1179 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 ATP6V0A1Q93050 837 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 SMARCAD1Q9H4L7 1026 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 UPF2Q9HAU5 1272 aaKnown RBP15.05■□□□□ -0
LINC00399-201ENST00000439008 NOD1Q9Y239 953 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 PTPRSQ13332 1948 aa15.05■□□□□ -0
LINC00399-201ENST00000439008 EVPLQ92817 2033 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 CCDC194A0A1B0GVG4 234 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 NBNO60934 754 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 XBP1P17861 261 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 KRT2P35908 639 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 DEFB128Q7Z7B8 93 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 UNC45AQ9H3U1 944 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 TBC1D22BQ9NU19 505 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 ERAP1Q9NZ08 941 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 ZNF215Q9UL58 517 aaPredicted RBP15.04■□□□□ -0
LINC00399-201ENST00000439008 CDH23Q9H251 3354 aa15.04■□□□□ -0
LINC00399-201ENST00000439008 GBF1Q92538 1859 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 ZBTB42B2RXF5 422 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 KIF28PB7ZC32 967 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 ZNF862O60290 1169 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 INSRRP14616 1297 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 SELPP16109 830 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 STAT5BP51692 787 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 BFSP2Q13515 415 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 GRIK4Q16099 956 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 UGCGQ16739 394 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 ZNF746Q6NUN9 644 aaPredicted RBP15.03■□□□□ -0
LINC00399-201ENST00000439008 SWSAP1Q6NVH7 229 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 MOXD1Q6UVY6 613 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 OTOP2Q7RTS6 562 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 PLPPR4Q7Z2D5 763 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 NEK8Q86SG6 692 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 CAGE1Q8TC20 777 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 AFAP1L1Q8TED9 768 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 HAS1Q92839 578 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 RNPC3Q96LT9 517 aaKnown RBP15.03■□□□□ -0
LINC00399-201ENST00000439008 KCNMB3Q9NPA1 279 aa15.03■□□□□ -0
LINC00399-201ENST00000439008 DDX25Q9UHL0 483 aaKnown RBP15.03■□□□□ -0
LINC00399-201ENST00000439008 LOXHD1Q8IVV2 1947 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 NRCAMQ92823 1304 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 MBLAC1A4D2B0 266 aaPredicted RBP15.02■□□□□ -0
LINC00399-201ENST00000439008 GRXCR1A8MXD5 290 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 EML1O00423 815 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 ST18O60284 1047 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 PPFIA1Q13136 1202 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 LRCH2Q5VUJ6 765 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 LRRC8DQ7L1W4 858 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 POTEDQ86YR6 584 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 FBXO18Q8NFZ0 1043 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 HERVK_113Q902F9 699 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 RIT2Q99578 217 aa15.02■□□□□ -0
LINC00399-201ENST00000439008 MAFBQ9Y5Q3 323 aaPredicted RBP15.02■□□□□ -0
LINC00399-201ENST00000439008 COL6A3P12111 3177 aa15.02□□□□□ -0.01
LINC00399-201ENST00000439008 BACH1O14867 736 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 CHMP2AO43633 222 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 CCNT1O60563 726 aaKnown RBP15.01□□□□□ -0.01
LINC00399-201ENST00000439008 GAS7O60861 476 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 FGBP02675 491 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 THPOP40225 353 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 IGBP1P78318 339 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 KRT76Q01546 638 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 PPP4R3AQ6IN85 833 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 Q7L0L9 218 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 RETREG2Q8NC44 543 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 C8orf76Q96K31 380 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 AZI2Q9H6S1 392 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 ZNF302Q9NR11 478 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 DISC1Q9NRI5 854 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 VAV3Q9UKW4 847 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 PCDHA10Q9Y5I2 948 aa15.01□□□□□ -0.01
LINC00399-201ENST00000439008 IGSF9BQ9UPX0 1349 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 POTEB3A0JP26 581 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 STBD1O95210 358 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 CHRNA1P02708 482 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 CXCL10P02778 98 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 CTSHP09668 335 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 HMGN5P82970 282 aaKnown RBP15□□□□□ -0.01
LINC00399-201ENST00000439008 MIS18BP1Q6P0N0 1132 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 PDXDC2PQ6P474 469 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 PSRC1Q6PGN9 363 aaPredicted RBP15□□□□□ -0.01
LINC00399-201ENST00000439008 POTEBQ6S5H4 581 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 TRMT1LQ7Z2T5 733 aaKnown RBP15□□□□□ -0.01
LINC00399-201ENST00000439008 TEKT3Q9BXF9 490 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 GABBR1Q9UBS5 961 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 TUBE1Q9UJT0 475 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 TRPC6Q9Y210 931 aa15□□□□□ -0.01
LINC00399-201ENST00000439008 TMEM150BA6NC51 233 aa14.99□□□□□ -0.01
LINC00399-201ENST00000439008 GCFC2P16383 781 aaKnown RBP14.99□□□□□ -0.01
LINC00399-201ENST00000439008 PBX2P40425 430 aa14.99□□□□□ -0.01
LINC00399-201ENST00000439008 SPIRE1Q08AE8 756 aa14.99□□□□□ -0.01
LINC00399-201ENST00000439008 TRIM29Q14134 588 aa14.99□□□□□ -0.01
LINC00399-201ENST00000439008 SMAP1Q8IYB5 467 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms