RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SRRDQ9UH36 339 aa4.68□□□□□ -1.66
HMGB1P18-201ENST00000438801 PATE3B3GLJ2 98 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 NKRFO15226 690 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 KLF4O43474 513 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 FBXO21O94952 628 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 CHGBP05060 677 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 FGFR1P11362 822 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 C6P13671 934 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 GPR85P60893 370 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 NTRK3Q16288 839 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 SKIDA1Q1XH10 827 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 STYK1Q6J9G0 422 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 ZNF585AQ6P3V2 769 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 Q6ZUG5 572 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 RALYLQ86SE5 291 aaKnown RBP4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 IFNL3Q8IZI9 196 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 OSBP2Q969R2 916 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 MEGF9Q9H1U4 602 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 ARHGEF4Q9NR80 690 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 ARHGAP20Q9P2F6 1191 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 ZFP69BQ9UJL9 534 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 TELO2Q9Y4R8 837 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 PKD1L2Q7Z442 2459 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 CUL9Q8IWT3 2517 aa4.67□□□□□ -1.66
HMGB1P18-201ENST00000438801 KNG1P01042 644 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 SOD2P04179 222 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 ENO2P09104 434 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 PABPC1P11940 636 aaKnown RBP4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 TACR2P21452 398 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 GLRBP48167 497 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 PFKPQ01813 784 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 HABP4Q5JVS0 413 aaKnown RBP4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 CD276Q5ZPR3 534 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 NSMFQ6X4W1 530 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 PALM2Q8IXS6 379 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 STPG3Q8N7X2 389 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 SLC43A3Q8NBI5 491 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 ST13P5Q8NFI4 369 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 WWC2-AS2Q96NR7 200 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 GMLQ99445 158 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 KCND1Q9NSA2 647 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 IGSF5Q9NSI5 407 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 DSEQ9UL01 958 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 TCAF1Q9Y4C2 921 aa4.66□□□□□ -1.66
HMGB1P18-201ENST00000438801 TRAV20A0A0B4J274 112 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 BLACEA4D250 179 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF839A8K0R7 811 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 FAM47E-STBD1D6RA91 191 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 CNOT4O95628 575 aaKnown RBP4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 SELENOPP49908 381 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 EPHA5P54756 1037 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 KCTD1Q719H9 257 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 LRRC47Q8N1G4 583 aaKnown RBP4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 Q8N1X5 172 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 AJUBAQ96IF1 538 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 SCAND2PQ9GZW5 306 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 IPPKQ9H8X2 491 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 SEC61A2Q9H9S3 476 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 LRRC7Q96NW7 1537 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 CEP170Q5SW79 1584 aa4.65□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF623O75123 536 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 IL18BPO95998 194 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 CSF2RBP32927 897 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 GDF5P43026 501 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 IFRD2Q12894 506 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 R3HDM1Q15032 1099 aaKnown RBP4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 YOD1Q5VVQ6 348 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 CRIP3Q6Q6R5 217 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 DPH6Q7L8W6 267 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 GPR155Q7Z3F1 870 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 IFNL2Q8IZJ0 200 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 Q8TCH9 128 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 SORCS2Q96PQ0 1159 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 ALG1Q9BT22 464 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 ZNF747Q9BV97 191 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 KATNBL1Q9H079 304 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 VPS11Q9H270 941 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 SEMA4AQ9H3S1 761 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 SLC4A7Q9Y6M7 1214 aa4.64□□□□□ -1.67
HMGB1P18-201ENST00000438801 ASXL2Q76L83 1435 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 H0Y858 1186 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 ACOT7O00154 380 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 MUSKO15146 869 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 AMHP03971 560 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 HSPA6P17066 643 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 RAB33AQ14088 237 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 REXO1L1PQ8IX06 675 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 GNRHR2Q96P88 292 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 LMF1Q96S06 567 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 TACO1Q9BSH4 297 aaKnown RBP4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 CD244Q9BZW8 370 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 TESMINQ9Y4I5 508 aa4.63□□□□□ -1.67
HMGB1P18-201ENST00000438801 CDK12Q9NYV4 1490 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 ADCY10Q96PN6 1610 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 CYR61O00622 381 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 FZD7O75084 574 aa4.62□□□□□ -1.67
HMGB1P18-201ENST00000438801 ACVRL1P37023 503 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms