RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 EPHB6O15197 1021 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 PHACTR2O75167 634 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 RHOXF2BP0C7M4 288 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 MEA1Q16626 185 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 SUPT20HL1Q3ZLR7 823 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 BEND6Q5SZJ8 279 aaPredicted RBP15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 CCDC122Q5T0U0 273 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 TEX2Q8IWB9 1127 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 SLFN12Q8IYM2 578 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 CYP2W1Q8TAV3 490 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 RHOXF2Q9BQY4 288 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 NUP58Q9BVL2 599 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 FGFBP2Q9BYJ0 223 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 NHEJ1Q9H9Q4 299 aaPredicted RBP15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 ZNHIT6Q9NWK9 470 aaKnown RBP15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 PPP1R9AQ9ULJ8 1098 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 NPHP3-ACAD11A0A0J9YXS1 232 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 CIITAP33076 1130 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 ZNF76P36508 570 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 ZBED6P86452 979 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 VWA3BQ502W6 1294 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 KIAA1328Q86T90 577 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 DNAJC19Q96DA6 116 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 ERGIC2Q96RQ1 377 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 NDST4Q9H3R1 872 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 SLC38A10Q9HBR0 1119 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 RAVER2Q9HCJ3 691 aaKnown RBP15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 ABCB6Q9NP58 842 aa15.34■□□□□ 0.05
PTCHD3-201ENST00000438700 CCDC151A5D8V7 595 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 PLEKP08567 350 aaPredicted RBP15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 CYP3A4P08684 503 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 HMGCS2P54868 508 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 UBXN2AP68543 259 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 CYP27A1Q02318 531 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 EHHADHQ08426 723 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 RETREG2Q8NC44 543 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 IPO4Q8TEX9 1081 aaKnown RBP15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 PANK4Q9NVE7 773 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 RCCD1A6NED2 376 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 ADM5C9JUS6 153 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 NCAPH2Q6IBW4 605 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 LRRC55Q6ZSA7 311 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 CCDC155Q8N6L0 562 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 CEP112Q8N8E3 955 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 EXOC4Q96A65 974 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 MMRN2Q9H8L6 949 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 MYO1AQ9UBC5 1043 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 HDAC6Q9UBN7 1215 aa15.33■□□□□ 0.04
PTCHD3-201ENST00000438700 NFIBO00712 420 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 TBX3O15119 743 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 MSH4O15457 936 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 ALAS1P13196 640 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 LRRC63Q05C16 580 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 FAM26FQ5R3K3 315 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 MYOCDQ8IZQ8 938 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 DCPSQ96C86 337 aaKnown RBP15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 LRRC27Q9C0I9 530 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 LACRTQ9GZZ8 138 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 RASSF4Q9H2L5 321 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 HAUS4Q9H6D7 363 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 HOMER2Q9NSB8 354 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 FAN1Q9Y2M0 1017 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 POTEFA5A3E0 1075 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 IPO7O95373 1038 aaKnown RBP15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 POTEIP0CG38 1075 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 CYLC1P35663 651 aaPredicted RBP15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 MAN2A1Q16706 1144 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 POTEGQ6S5H5 508 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 GPBP1Q86WP2 473 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 SULF1Q8IWU6 871 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 CLEC4DQ8WXI8 215 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 NT5C3AQ9H0P0 336 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 ZHX3Q9H4I2 956 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 PLEKHA4Q9H4M7 779 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
PTCHD3-201ENST00000438700 RLFQ13129 1914 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 IGLV3-22A0A075B6J6 115 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 MED24O75448 989 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 USP2O75604 605 aaPredicted RBP15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 PLA2G4BP0C869 781 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 ACTN2P35609 894 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 HSD17B4P51659 736 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 KRT83P78385 493 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 SPIRE1Q08AE8 756 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 NOL9Q5SY16 702 aaKnown RBP15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 KRT26Q7Z3Y9 468 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 SRLQ86TD4 932 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 GOLGA5Q8TBA6 731 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 JAKMIP2Q96AA8 810 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 ATG4CQ96DT6 458 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 RRP15Q9Y3B9 282 aaKnown RBP15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 CTDP1Q9Y5B0 961 aaPredicted RBP15.31■□□□□ 0.04
PTCHD3-201ENST00000438700 COL11A1P12107 1806 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms