RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ANAPC16Q96DE5 110 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 TTC14Q96N46 770 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 SAMD11Q96NU1 681 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 GPR101Q96P66 508 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 RBM15Q96T37 977 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 SELENOOQ9BVL4 669 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 CAAP1Q9H8G2 361 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 ADAMTS1Q9UHI8 967 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 EVLQ9UI08 416 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 ST6GALNAC2Q9UJ37 374 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 FBXO2Q9UK22 296 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 RABGAP1Q9Y3P9 1069 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 PTCH2Q9Y6C5 1203 aa4.41□□□□□ -1.7
HMGB1P12-201ENST00000438594 ROBO2Q9HCK4 1378 aa4.4□□□□□ -1.7
HMGB1P12-201ENST00000438594 SMAD7O15105 426 aaKnown RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 FGF10O15520 208 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 TBC1D8O95759 1140 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 PLATP00750 562 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 CD3EP07766 207 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 CT47B1P0C2W7 299 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 EIF4A3P38919 411 aaKnown RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 HALP42357 657 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 PIN1Q13526 163 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 DDR2Q16832 855 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 TDRD10Q5VZ19 366 aaKnown RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 GLB1LQ6UWU2 654 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 SPRED1Q7Z699 444 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 MORC1Q86VD1 984 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 SYNPOQ8N3V7 929 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 MAGEB6Q8N7X4 407 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 UBR7Q8N806 425 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 KIAA1958Q8N8K9 716 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 KISS1RQ969F8 398 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 SKA1Q96BD8 255 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 MFSD3Q96ES6 412 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 DDX11Q96FC9 970 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 MPP4Q96JB8 637 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 SERINC2Q96SA4 455 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 MENTQ9BUN1 341 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 FAM86C1Q9NVL1 165 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 C9orf78Q9NZ63 289 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 PRR13Q9NZ81 148 aa4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 FEZ2Q9UHY8 353 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 NOB1Q9ULX3 412 aaKnown RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 R3HCC1Q9Y3T6 440 aaKnown RBP4.4□□□□□ -1.71
HMGB1P12-201ENST00000438594 A0A1W2PRQ8 180 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 C9IYK1 514 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 C1QTNF3-AMACRE9PGA6 284 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 TACR2P21452 398 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 L1CAMP32004 1257 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 DEKP35659 375 aaKnown RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 CRKP46108 304 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 PPM1FP49593 454 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 LRRFIP1Q32MZ4 808 aaKnown RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 GFOD2Q3B7J2 385 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 RGL3Q3MIN7 710 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 CCDC92Q53HC0 331 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 ARMC3Q5W041 872 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 LVRNQ6Q4G3 990 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 C16orf54Q6UWD8 224 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 ANKRD23Q86SG2 305 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 RNF180Q86T96 592 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 TTC9BQ8N6N2 239 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 ENAHQ8N8S7 591 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 ADAMTS17Q8TE56 1095 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 DVL3Q92997 716 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 HOOK2Q96ED9 719 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 DHRS1Q96LJ7 313 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 PTCHD1Q96NR3 888 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 STRBPQ96SI9 672 aaKnown RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 SLC9A7Q96T83 725 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 HERPUD2Q9BSE4 406 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 SRRTQ9BXP5 876 aaKnown RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 LRRC3Q9BY71 257 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 EHMT1Q9H9B1 1298 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 ST7Q9NRC1 585 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 SPATA6Q9NWH7 488 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 SUCOQ9UBS9 1254 aaKnown RBP4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 USP25Q9UHP3 1055 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 INVSQ9Y283 1065 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 RWDD3Q9Y3V2 267 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 IPPQ9Y573 584 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 KAT6BQ8WYB5 2073 aa4.39□□□□□ -1.71
HMGB1P12-201ENST00000438594 RASSF10A6NK89 507 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 hCG_1984214I3L0E3 225 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 DIAPH1O60610 1272 aaKnown RBP4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 SLPIP03973 132 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 RPN1P04843 607 aaKnown RBP4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 SOX5P35711 763 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 ZNF165P49910 485 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 CORO7P57737 925 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 APOBRQ0VD83 1088 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 PICALMQ13492 652 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 PUM3Q15397 648 aaKnown RBP4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 CT47A1Q5JQC4 288 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 DCAF15Q66K64 600 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 MMS22LQ6ZRQ5 1243 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 USP51Q70EK9 711 aa4.38□□□□□ -1.71
HMGB1P12-201ENST00000438594 LIMS2Q7Z4I7 341 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms