RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 FKBP3Q00688 224 aaKnown RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 LDLRAD1Q5T700 205 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 ZNF746Q6NUN9 644 aaPredicted RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 STXBP4Q6ZWJ1 553 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.05■□□□□ 0.32
SGCE-205ENST00000437425 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 CNGA4Q8IV77 575 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 CEP63Q96MT8 703 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 INPP4AQ96PE3 977 aaPredicted RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 UIMC1Q96RL1 719 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 SENP7Q9BQF6 1050 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 NAA15Q9BXJ9 866 aaKnown RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 SEMA6BQ9H3T3 888 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 A1CFQ9NQ94 594 aaKnown RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 OLFML3Q9NRN5 406 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 DBR1Q9UK59 544 aaKnown RBP17.05■□□□□ 0.32
SGCE-205ENST00000437425 PCDHA2Q9Y5H9 948 aa17.05■□□□□ 0.32
SGCE-205ENST00000437425 NFASCO94856 1347 aa17.04■□□□□ 0.32
SGCE-205ENST00000437425 AKR1B15C9JRZ8 316 aaPredicted RBP17.04■□□□□ 0.32
SGCE-205ENST00000437425 QARSP47897 775 aaKnown RBP17.04■□□□□ 0.32
SGCE-205ENST00000437425 CTTNQ14247 550 aaKnown RBP17.04■□□□□ 0.32
SGCE-205ENST00000437425 EDRF1Q3B7T1 1238 aa17.04■□□□□ 0.32
SGCE-205ENST00000437425 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
SGCE-205ENST00000437425 RINT1Q6NUQ1 792 aa17.04■□□□□ 0.32
SGCE-205ENST00000437425 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
SGCE-205ENST00000437425 PANX2Q96RD6 677 aa17.04■□□□□ 0.32
SGCE-205ENST00000437425 LXNQ9BS40 222 aa17.04■□□□□ 0.32
SGCE-205ENST00000437425 TMX1Q9H3N1 280 aa17.04■□□□□ 0.32
SGCE-205ENST00000437425 UBE4BO95155 1302 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 TESPA1A2RU30 521 aaPredicted RBP17.03■□□□□ 0.32
SGCE-205ENST00000437425 STX10O60499 249 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 TUBB4AP04350 444 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 GUCY2CP25092 1073 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 RETREG2Q8NC44 543 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
SGCE-205ENST00000437425 REEP2Q9BRK0 252 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 NUP58Q9BVL2 599 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 SPATC1LQ9H0A9 340 aa17.03■□□□□ 0.32
SGCE-205ENST00000437425 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.32
SGCE-205ENST00000437425 ARHGAP6O43182 974 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 FAM13AO94988 1023 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 MTIF2P46199 727 aaKnown RBP17.02■□□□□ 0.32
SGCE-205ENST00000437425 UBXN1Q04323 297 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 ITGB3BPQ13352 177 aaPredicted RBP17.02■□□□□ 0.32
SGCE-205ENST00000437425 SNAPC2Q13487 334 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 BMT2Q1RMZ1 405 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 ZCWPW2Q504Y3 356 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 FKBP15Q5T1M5 1219 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 C1orf186Q6ZWK4 172 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 C4orf19Q8IY42 314 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 OPTNQ96CV9 577 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 VPS16Q9H269 839 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 PARVGQ9HBI0 331 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 TAB2Q9NYJ8 693 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 PNMA3Q9UL41 463 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 SAMM50Q9Y512 469 aa17.02■□□□□ 0.32
SGCE-205ENST00000437425 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 TEX33O43247 280 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 EIF3JO75822 258 aaKnown RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 PSMC5P62195 406 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 HERVK_113P62684 666 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 ARID5BQ14865 1188 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 STXBP2Q15833 593 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 CREBRFQ8IUR6 639 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 HPS3Q969F9 1004 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 CLMNQ96JQ2 1002 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 ZHX3Q9H4I2 956 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 CALUO43852 315 aaPredicted RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 ICAM3P32942 547 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 ZNF131P52739 623 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 ALCAMQ13740 583 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 EPM2AIP1Q7L775 607 aaPredicted RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 ZC3H3Q8IXZ2 948 aaKnown RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 SLC17A8Q8NDX2 589 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 PIGOQ8TEQ8 1089 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 SCFD1Q8WVM8 642 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 BAG1Q99933 345 aaPredicted RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 NOC4LQ9BVI4 516 aaKnown RBP17.01■□□□□ 0.31
SGCE-205ENST00000437425 ANKEF1Q9NU02 776 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 TRAF3IP3Q9Y228 551 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 CLEC11AQ9Y240 323 aa17.01■□□□□ 0.31
SGCE-205ENST00000437425 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
SGCE-205ENST00000437425 PDXKO00764 312 aa17■□□□□ 0.31
SGCE-205ENST00000437425 COBLO75128 1261 aa17■□□□□ 0.31
SGCE-205ENST00000437425 RPL13P26373 211 aaKnown RBP17■□□□□ 0.31
SGCE-205ENST00000437425 TERF1P54274 439 aa17■□□□□ 0.31
SGCE-205ENST00000437425 MARSP56192 900 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms