RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
RBFOX1-205ENST00000436368 PRR12Q9ULL5 1215 aa17.28■□□□□ 0.36
RBFOX1-205ENST00000436368 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 RCCD1A6NED2 376 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 FAM196BA6NMK8 535 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 BTNL10A8MVZ5 291 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 MSH4O15457 936 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 FAM13AO94988 1023 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 KLHL30Q0D2K2 578 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 RAPGEF1Q13905 1077 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 SLC18A3Q16572 532 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 AOC3Q16853 763 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 ASTE1Q2TB18 679 aaPredicted RBP17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 SFR1Q86XK3 245 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 OGFOD1Q8N543 542 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 FAM151AQ8WW52 585 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 LENG9Q96B70 501 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 REEP2Q9BRK0 252 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 TBC1D7Q9P0N9 293 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 PNMA2Q9UL42 364 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 TMX2Q9Y320 296 aa17.27■□□□□ 0.36
RBFOX1-205ENST00000436368 GRID2IPA4D2P6 1211 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 ZNF263O14978 683 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 EPHB6O15197 1021 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 TNNT3P45378 269 aaPredicted RBP17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 KCNMA1Q12791 1236 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 TNIP1Q15025 636 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 DLGAP5Q15398 846 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 CFAP221Q4G0U5 840 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 ARSHQ5FYA8 562 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 SPAG5Q96R06 1193 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 OSBPL9Q96SU4 736 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 EIF2AK1Q9BQI3 630 aaKnown RBP17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 FAM86B1E9PN63 330 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 GFPT2O94808 682 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 CLSTN1O94985 981 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 MOCS3O95396 460 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 PLEKP08567 350 aaPredicted RBP17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 FAM86B2P0C5J1 330 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 CCDC172P0C7W6 258 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 SPATA31C1P0DKV0 1188 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 KCNH2Q12809 1159 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 PPP2R5CQ13362 524 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 LRCH2Q5VUJ6 765 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 HGSNATQ68CP4 663 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 MSL1Q68DK7 614 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 GBP6Q6ZN66 633 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 MKNK1Q9BUB5 465 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 NLRC4Q9NPP4 1024 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 FEM1BQ9UK73 627 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 ODF2LQ9ULJ1 636 aa17.26■□□□□ 0.35
RBFOX1-205ENST00000436368 CES2O00748 559 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 TBC1D12O60347 775 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 GAS7O60861 476 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 FLOT1O75955 427 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 GCNT3O95395 438 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 NR3C1P04150 777 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 AARSP49588 968 aaKnown RBP eCLIP17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 PRELPP51888 382 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 EXOC3L4Q17RC7 722 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 GLIS3Q8NEA6 775 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 TAF4BQ92750 862 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 SLC5A5Q92911 643 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 CCDC102AQ96A19 550 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 GANQ9H2C0 597 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 PDE11AQ9HCR9 933 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 ST7Q9NRC1 585 aa17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 CWC15Q9P013 229 aaKnown RBP17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.25■□□□□ 0.35
RBFOX1-205ENST00000436368 NPHP3-ACAD11A0A0J9YXS1 232 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 TNFRSF8P28908 595 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 GFPT1Q06210 699 aaPredicted RBP17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 ALCAMQ13740 583 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 NAB2Q15742 525 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 LMBR1Q8WVP7 490 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 GJA10Q969M2 543 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 VTI1AQ96AJ9 217 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 VCPKMTQ9H867 229 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 MLXIPQ9HAP2 919 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 PARVGQ9HBI0 331 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 STK32BQ9NY57 414 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 ZBTB21Q9ULJ3 1066 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 CAPN6Q9Y6Q1 641 aa17.24■□□□□ 0.35
RBFOX1-205ENST00000436368 MYH7BA7E2Y1 1941 aa17.23■□□□□ 0.35
RBFOX1-205ENST00000436368 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
RBFOX1-205ENST00000436368 SRGAP2O75044 1071 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms