RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 NGRNQ9NPE2 291 aaKnown RBP5.96□□□□□ -1.46
HMGB1P45-201ENST00000435986 PAK6Q9NQU5 681 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P45-201ENST00000435986 H2AFY2Q9P0M6 372 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P45-201ENST00000435986 ASH2LQ9UBL3 628 aa5.96□□□□□ -1.46
HMGB1P45-201ENST00000435986 EBF1Q9UH73 591 aa5.96□□□□□ -1.46
HMGB1P45-201ENST00000435986 ZNF180Q9UJW8 692 aa5.96□□□□□ -1.46
HMGB1P45-201ENST00000435986 PRAMEF25A6NGN4 478 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 ABLIM1O14639 778 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 KCNK3O14649 394 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 AKAP10O43572 662 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 BUB1BO60566 1050 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 PTPN1P18031 435 aaKnown RBP5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 SDHAP31040 664 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 RECQLP46063 649 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 HERVK_113P62684 666 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 SMAD3P84022 425 aaKnown RBP5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 EPHA7Q15375 998 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 SMAD2Q15796 467 aaKnown RBP5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 NLRX1Q86UT6 975 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 ABHD4Q8TB40 342 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 FUBP3Q96I24 572 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 KRTAP4-12Q9BQ66 201 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 PLCD4Q9BRC7 762 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 CD244Q9BZW8 370 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 ZDHHC5Q9C0B5 715 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 C14orf119Q9NWQ9 140 aa5.95□□□□□ -1.46
HMGB1P45-201ENST00000435986 TCRBV5S4A2TA0A5A2 114 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 F8W031 263 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 FOXP2O15409 715 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 KDM1AO60341 852 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 PSPNO60542 156 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 CEBPAP49715 358 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 KRT85P78386 507 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 CLUL1Q15846 466 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 ABCB5Q2M3G0 1257 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 CPZQ66K79 652 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 ESPNLQ6ZVH7 1005 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 CBLL1Q75N03 491 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 PHYKPLQ8IUZ5 450 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 C7orf31Q8N865 590 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 TTLL11Q8NHH1 800 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 WDR48Q8TAF3 677 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 SH3RF2Q8TEC5 729 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 SSH1Q8WYL5 1049 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 CDH19Q9H159 772 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 SLC6A17Q9H1V8 727 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 PRDM7Q9NQW5 492 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 PALD1Q9ULE6 856 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 ANKRD6Q9Y2G4 727 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 GIT1Q9Y2X7 761 aa5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 LUC7L2Q9Y383 392 aaKnown RBP5.94□□□□□ -1.46
HMGB1P45-201ENST00000435986 ST20-MTHFSA0A0A6YYL1 179 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 KLHL33A6NCF5 533 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 TGM5O43548 720 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 PLIN1O60240 522 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 CAND2O75155 1236 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 RFPL1O75677 317 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 DBHP09172 617 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 MSL3P1P0C860 447 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 MTHFD2P13995 350 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 YBX3P16989 372 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 ZSCAN20P17040 1043 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 ATF3P18847 181 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 IRAK1P51617 712 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 SCAND1P57086 179 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 ERVK-21P61565 698 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 CREB3L3Q68CJ9 461 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 CCSAPQ6IQ19 270 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 HIPK4Q8NE63 616 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 FAXDC2Q96IV6 333 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 TRIM8Q9BZR9 551 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 PDGFDQ9GZP0 370 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 RC3H2Q9HBD1 1191 aaKnown RBP5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 MSRAQ9UJ68 235 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 PNMA8BQ9ULN7 279 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 TNKSO95271 1327 aa5.93□□□□□ -1.46
HMGB1P45-201ENST00000435986 UBA6A0AVT1 1052 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 BIN1O00499 593 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 SCGB1D2O95969 90 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 MT-CO1P00395 513 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 RBP3P10745 1247 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 ERVFRD-1P60508 538 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 RAB3GAP1Q15042 981 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 GFOD2Q3B7J2 385 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 PAN2Q504Q3 1202 aaKnown RBP5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 TTC38Q5R3I4 469 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 EFCAB2Q5VUJ9 269 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 CXorf57Q6NSI4 855 aaKnown RBP5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 ZC3H18Q86VM9 953 aaKnown RBP5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 SIRT2Q8IXJ6 389 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 C1orf162Q8NEQ5 155 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 CALML6Q8TD86 181 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 FERMT2Q96AC1 680 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 MAML3Q96JK9 1138 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 WNT8AQ9H1J5 351 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 C19orf44Q9H6X5 657 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 TNFRSF12AQ9NP84 129 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 ARHGAP28Q9P2N2 729 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 IP6K2Q9UHH9 426 aa5.92□□□□□ -1.46
HMGB1P45-201ENST00000435986 INVSQ9Y283 1065 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms