RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 CCDC127Q96BQ5 260 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 RNF146Q9NTX7 359 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 CDC23Q9UJX2 597 aa13.38□□□□□ -0.27
CLDN4-203ENST00000435050 RPA1P27694 616 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 GTF2F1P35269 517 aaKnown RBP eCLIP13.37□□□□□ -0.27
CLDN4-203ENST00000435050 KIF11P52732 1056 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 KCNH2Q12809 1159 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 GOLGA6L1Q8N7Z2 621 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ATG4CQ96DT6 458 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ARAP2Q8WZ64 1704 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 DOCK2Q92608 1830 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 MOCS3O95396 460 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 GNA14O95837 355 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ABL1P00519 1130 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 KCNJ6P48051 423 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 CETN1Q12798 172 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 SLC16A10Q8TF71 515 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
CLDN4-203ENST00000435050 PURBQ96QR8 312 aaKnown RBP13.37□□□□□ -0.27
CLDN4-203ENST00000435050 PSMD1Q99460 953 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ADAMTS1Q9UHI8 967 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ITIH6Q6UXX5 1313 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 A0A1W2PQC6 194 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ZMYND10O75800 440 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ACTN1P12814 892 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 GFPT1Q06210 699 aaPredicted RBP13.37□□□□□ -0.27
CLDN4-203ENST00000435050 KNOP1Q1ED39 458 aaKnown RBP13.37□□□□□ -0.27
CLDN4-203ENST00000435050 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 FAM186BQ8IYM0 893 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ANKRD35Q8N283 1001 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 RETREG2Q8NC44 543 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 MLXIPQ9HAP2 919 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 GGA3Q9NZ52 723 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 LARSQ9P2J5 1176 aaKnown RBP13.37□□□□□ -0.27
CLDN4-203ENST00000435050 SAR1BQ9Y6B6 198 aa13.37□□□□□ -0.27
CLDN4-203ENST00000435050 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 EFCAB8A8MWE9 144 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 PHACTR2O75167 634 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 NR3C1P04150 777 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 C7orf43Q8WVR3 580 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 CASZ1Q86V15 1759 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 BAATQ14032 418 aaPredicted RBP13.36□□□□□ -0.27
CLDN4-203ENST00000435050 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 TAAR1Q96RJ0 339 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 DUSP10Q9Y6W6 482 aa13.36□□□□□ -0.27
CLDN4-203ENST00000435050 CASP5P51878 434 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 KIAA0753Q2KHM9 967 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
CLDN4-203ENST00000435050 PADI6Q6TGC4 694 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
CLDN4-203ENST00000435050 LRRN2O75325 713 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
CLDN4-203ENST00000435050 CLCN6P51797 869 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 RPS6P62753 249 aaKnown RBP13.35□□□□□ -0.27
CLDN4-203ENST00000435050 NCAPG2Q86XI2 1143 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 TMEM110-MUSTN1A8MSY1 372 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 CTIFO43310 598 aaKnown RBP13.35□□□□□ -0.27
CLDN4-203ENST00000435050 EYA4O95677 639 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 TRIM49P0CI25 452 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 TRIM49CP0CI26 452 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 ABCB4P21439 1286 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 PEX3P56589 373 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 SEPT14Q6ZU15 432 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 TCHPQ9BT92 498 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 IKZF4Q9H2S9 585 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 BCAS3Q9H6U6 928 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 GCNT4Q9P109 453 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 TMEM150BA6NC51 233 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 NKRFO15226 690 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLDN4-203ENST00000435050 KCNA1Q09470 495 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 GBP6Q6ZN66 633 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 SULF1Q8IWU6 871 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 UNC45AQ9H3U1 944 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 KCNH7Q9NS40 1196 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 PCDHA13Q9Y5I0 950 aa13.35□□□□□ -0.27
CLDN4-203ENST00000435050 MORC2Q9Y6X9 1032 aaPredicted RBP13.35□□□□□ -0.27
CLDN4-203ENST00000435050 A0A1B0GUL6 1792 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 USP14P54578 494 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 GIT2Q14161 759 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 IQCEQ6IPM2 695 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 DNAJC19Q96DA6 116 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 GBP3Q9H0R5 595 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 KCNMB3Q9NPA1 279 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 CSADQ9Y600 493 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms