RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 FTHL17Q9BXU8 183 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 KCNH7Q9NS40 1196 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 SQORQ9Y6N5 450 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 PRRC2BQ5JSZ5 2229 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 CNTNAP5Q8WYK1 1306 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 COL4A4P53420 1690 aaPredicted RBP16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 CHRNA1P02708 482 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 RB1P06400 928 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 FGD1P98174 961 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 MGAT3Q09327 533 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 GPM6BQ13491 265 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 TSGA10IPQ3SY00 556 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 CEP55Q53EZ4 464 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 WWC2Q6AWC2 1192 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 PLPPR4Q7Z2D5 763 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 TMEM192Q8IY95 271 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 PKD2L1Q9P0L9 805 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 TRPC6Q9Y210 931 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 FAM50BQ9Y247 325 aa16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 BAZ2BQ9UIF8 2168 aaKnown RBP16.98■□□□□ 0.31
RPUSD3-208ENST00000433972 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 GOLGA8BA8MQT2 603 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 NCK2O43639 380 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 ZNF76P36508 570 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 LEXMQ3ZCV2 418 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 RUFY4Q6ZNE9 571 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 CCDC12Q8WUD4 166 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 DNAJB3Q8WWF6 145 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 C11orf84Q9BUA3 381 aaPredicted RBP16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 LMAN2LQ9H0V9 348 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 BARHL2Q9NY43 387 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 TELO2Q9Y4R8 837 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 PTPRSQ13332 1948 aa16.97■□□□□ 0.31
RPUSD3-208ENST00000433972 SMCO2A6NFE2 343 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 STAT5BP51692 787 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 IGBP1P78318 339 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 MRPS6P82932 125 aaKnown RBP16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 EXOSC10Q01780 885 aaKnown RBP16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 LPIN1Q14693 890 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 FBXO47Q5MNV8 452 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 NIPA1Q7RTP0 329 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 NME8Q8N427 588 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 BANK1Q8NDB2 785 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 ANO3Q9BYT9 981 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 NSUN3Q9H649 340 aaKnown RBP16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 CDY2AQ9Y6F7 541 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 V9GY48 417 aaPredicted RBP16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 REV3LO60673 3130 aa16.96■□□□□ 0.31
RPUSD3-208ENST00000433972 ADGRA3Q8IWK6 1321 aa16.96■□□□□ 0.3
RPUSD3-208ENST00000433972 KLF18A0A0U1RQI7 1052 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 C5orf67F2Z3F1 127 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 INSRRP14616 1297 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 KCNA5P22460 613 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 PSMA5P28066 241 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 HSPA4P34932 840 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 CTNNB1P35222 781 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 SREBF1P36956 1147 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 ACTR2P61160 394 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 MARCH8Q5T0T0 291 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 FAM160B1Q5W0V3 765 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 TCEAL9Q9UHQ7 104 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 PCDHA2Q9Y5H9 948 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 TRPV2Q9Y5S1 764 aa16.95■□□□□ 0.3
RPUSD3-208ENST00000433972 SIP14410 1827 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 POTEB3A0JP26 581 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 STXBP3O00186 592 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 ENPP3O14638 875 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 STAG3L1P0CL83 205 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 BTG3Q14201 252 aaPredicted RBP16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 ODR4Q5SWX8 454 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 POTEBQ6S5H4 581 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 PABPC5Q96DU9 382 aaKnown RBP16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 PLVAPQ9BX97 442 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 FAM49AQ9H0Q0 323 aaPredicted RBP16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 AGO4Q9HCK5 861 aaKnown RBP16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 NAP1L2Q9ULW6 460 aaPredicted RBP16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 MICAL3Q7RTP6 2002 aa16.94■□□□□ 0.3
RPUSD3-208ENST00000433972 SMIM35A0A1B0GVV1 85 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 MEIS1O00470 390 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 BMPR1AP36894 532 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 SETQ01105 290 aaPredicted RBP16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 FUT2Q10981 343 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 PAK2Q13177 524 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 CLP1Q92989 425 aaKnown RBP16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 PPP2R3CQ969Q6 453 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 OSBPL7Q9BZF2 842 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 BRPF3Q9ULD4 1205 aa16.93■□□□□ 0.3
RPUSD3-208ENST00000433972 ESYT2A0FGR8 921 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 BACH1O14867 736 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 HBP1O60381 514 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 ATG7O95352 703 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 GNA11P29992 359 aa16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
RPUSD3-208ENST00000433972 PLCB4Q15147 1175 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms