RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 A0A0A6YYK5 440 aaPredicted RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 MYO1CO00159 1063 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 MEIS2O14770 477 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 HSF2BPO75031 334 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 PHACTR2O75167 634 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 CYP3A4P08684 503 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 MUTP22033 750 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 EIF6P56537 245 aaKnown RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 ARHGAP4P98171 946 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 KCNH2Q12809 1159 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 SLC15A2Q16348 729 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 CDC37Q16543 378 aaPredicted RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 ARSHQ5FYA8 562 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 DPY19L2P1Q6NXN4 242 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 AMNQ9BXJ7 453 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 TYW1Q9NV66 732 aaKnown RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 ARMCX3Q9UH62 379 aaPredicted RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 FEZ2Q9UHY8 353 aaPredicted RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 DNM3Q9UQ16 869 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 EP400Q96L91 3159 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 MED24O75448 989 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 AFPP02771 609 aaKnown RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 NPR1P16066 1061 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 GAP43P17677 238 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 TNNC1P63316 161 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 GIT2Q14161 759 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 TATDN1Q6P1N9 297 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 KCTD1Q719H9 257 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 TBC1D5Q92609 795 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 OLFML3Q9NRN5 406 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 RBM12Q9NTZ6 932 aaKnown RBP15□□□□□ -0.01
COL6A3-207ENST00000433762 TMEM59LQ9UK28 342 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 NENFQ9UMX5 172 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 UBE4BO95155 1302 aa15□□□□□ -0.01
COL6A3-207ENST00000433762 EIF3DO15371 548 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL6A3-207ENST00000433762 PALMO75781 387 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 ZMYND10O75800 440 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 SSBP05455 408 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL6A3-207ENST00000433762 KRT18P05783 430 aaKnown RBP14.99□□□□□ -0.01
COL6A3-207ENST00000433762 NR2F2P24468 414 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 RAPGEF1Q13905 1077 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 SLFN13Q68D06 897 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 TMEM179Q6ZVK1 233 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 DRC1Q96MC2 740 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 PI4KBQ9UBF8 816 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 HDAC9Q9UKV0 1011 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 MYBP10242 640 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 KLRC1P26715 233 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 ALDH1B1P30837 517 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 NPEPPSP55786 919 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 BTNL9Q6UXG8 535 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 PODNQ7Z5L7 613 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 CATSPER3Q86XQ3 398 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 CLEC10AQ8IUN9 316 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 HDAC7Q8WUI4 952 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 RUFY1Q96T51 708 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 RASSF4Q9H2L5 321 aa14.99□□□□□ -0.01
COL6A3-207ENST00000433762 A0A087X0T9 212 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 PIK3CDO00329 1044 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 FAM228BP0C875 321 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 SLC16A2P36021 539 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 EZH2Q15910 746 aaKnown RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 KIAA0753Q2KHM9 967 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 IRF2BP2Q7Z5L9 587 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 VPS36Q86VN1 386 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 ACTRT1Q8TDG2 376 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 LENG9Q96B70 501 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 FGFBP2Q9BYJ0 223 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 SRRM3A6NNA2 597 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L15C9J2P7 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L13C9JLJ4 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L11C9JVI0 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L18D6R9N7 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L22D6RA61 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L17D6RBQ6 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L19D6RCP7 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L20D6RJB6 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 PLSCR1O15162 318 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 FLOT1O75955 427 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 SPATA31C1P0DKV0 1188 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 EEF2P13639 858 aaKnown RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 UCHL3P15374 230 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 NAP1L1P55209 391 aaKnown RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L24Q0WX57 530 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 USP17L6PQ6QN14 398 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 NELFCDQ8IXH7 590 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 GSPT2Q8IYD1 628 aaKnown RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 LMBR1Q8WVP7 490 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 TAF4BQ92750 862 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 MKNK1Q9BUB5 465 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 DNAJC18Q9H819 358 aa14.98□□□□□ -0.01
COL6A3-207ENST00000433762 COL11A2P13942 1736 aaPredicted RBP14.98□□□□□ -0.01
COL6A3-207ENST00000433762 ATRNL1Q5VV63 1379 aa14.97□□□□□ -0.01
COL6A3-207ENST00000433762 BHMG1C9JSJ3 638 aaPredicted RBP14.97□□□□□ -0.01
COL6A3-207ENST00000433762 NCK2O43639 380 aa14.97□□□□□ -0.01
COL6A3-207ENST00000433762 BUB1O43683 1085 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms