RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ADAMTS13Q76LX8 1427 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.9□□□□□ -1.14
HDAC9-213ENST00000433709 NFIBO00712 420 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 DGKIO75912 1065 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 CRTAMO95727 393 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 NOP9Q86U38 636 aaKnown RBP7.9□□□□□ -1.14
HDAC9-213ENST00000433709 MTDHQ86UE4 582 aaKnown RBP7.9□□□□□ -1.14
HDAC9-213ENST00000433709 MZB1Q8WU39 189 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.9□□□□□ -1.14
HDAC9-213ENST00000433709 SEC14L1Q92503 715 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 ALG3Q92685 438 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 ALG1Q9BT22 464 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 EPB41L1Q9H4G0 881 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 PALD1Q9ULE6 856 aa7.9□□□□□ -1.14
HDAC9-213ENST00000433709 CHD2O14647 1828 aaKnown RBP7.89□□□□□ -1.15
HDAC9-213ENST00000433709 STRCP1A6NGW2 1772 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 SETBP1Q9Y6X0 1596 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 CCDC144AA2RUR9 1427 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 ANKRD30BQ9BXX2 1392 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 ZBTB7AO95365 584 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 MED14OSP0DP75 135 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 COL6A2P12110 1019 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 FBLN1P23142 703 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 GLDCP23378 1020 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 SLC6A11P48066 632 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 PAK1Q13153 545 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 SLC9A5Q14940 896 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 TRIM61Q5EBN2 209 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 STEAP3Q658P3 488 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 MILR1Q7Z6M3 343 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 IGDCC3Q8IVU1 814 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 GSTCDQ8NEC7 633 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 PCDH19Q8TAB3 1148 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 SCLYQ96I15 445 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 CLUHP3Q96NS8 147 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 PPP1R16BQ96T49 567 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
HDAC9-213ENST00000433709 SFMBT1Q9UHJ3 866 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 PCDHA5Q9Y5H7 936 aa7.89□□□□□ -1.15
HDAC9-213ENST00000433709 JCADQ9P266 1359 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 SPATA31A6Q5VVP1 1343 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 IRS2Q9Y4H2 1338 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 N4BP3O15049 544 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 RASGRP1O95267 797 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 ASMTLO95671 621 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 ASGR2P07307 311 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 SRGAP2CP0DJJ0 459 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 PMLP29590 882 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 PKN1Q16512 942 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 GIMAP6Q6P9H5 292 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 PIP4K2CQ8TBX8 421 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 MPHOSPH9Q99550 1183 aa7.88□□□□□ -1.15
HDAC9-213ENST00000433709 SMG5Q9UPR3 1016 aaKnown RBP7.88□□□□□ -1.15
HDAC9-213ENST00000433709 KIF1BO60333 1816 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 ARVCFO00192 962 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 PLD2O14939 933 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 HGSO14964 777 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-213ENST00000433709 EFCAB14O75071 495 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 TSPAN15O95858 294 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 RAP1GAPP47736 663 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 BRAPQ7Z569 592 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 FGD2Q7Z6J4 655 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 BHLHE22Q8NFJ8 381 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-213ENST00000433709 MAGEB10Q96LZ2 347 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-213ENST00000433709 FANCLQ9NW38 375 aa7.87□□□□□ -1.15
HDAC9-213ENST00000433709 MED1Q15648 1581 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-213ENST00000433709 SETD5Q9C0A6 1442 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 ALKQ9UM73 1620 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 TCAF2A6NFQ2 919 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 NKRFO15226 690 aaKnown RBP eCLIP7.86□□□□□ -1.15
HDAC9-213ENST00000433709 KCNQ2O43526 872 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 BUB1BO60566 1050 aaPredicted RBP7.86□□□□□ -1.15
HDAC9-213ENST00000433709 TADA3O75528 432 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 GNAT1P11488 350 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 ATF2P15336 505 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 MC3RP41968 323 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 SSPNQ14714 243 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 C21orf62-AS1Q17RA5 79 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 EMC4Q5J8M3 183 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 OTOP3Q7RTS5 596 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 HOMER1Q86YM7 354 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 LRRC59Q96AG4 307 aaKnown RBP7.86□□□□□ -1.15
HDAC9-213ENST00000433709 TRIM39Q9HCM9 518 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 SLC6A20Q9NP91 592 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 CD320Q9NPF0 282 aa7.86□□□□□ -1.15
HDAC9-213ENST00000433709 MYO5BQ9ULV0 1848 aa7.85□□□□□ -1.15
HDAC9-213ENST00000433709 TARBP2Q15633 366 aaKnown RBP7.85□□□□□ -1.15
HDAC9-213ENST00000433709 CHRNA2Q15822 529 aa7.85□□□□□ -1.15
HDAC9-213ENST00000433709 TKFCQ3LXA3 575 aa7.85□□□□□ -1.15
HDAC9-213ENST00000433709 RBM12BQ8IXT5 1001 aaKnown RBP7.85□□□□□ -1.15
HDAC9-213ENST00000433709 ARRDC4Q8NCT1 418 aa7.85□□□□□ -1.15
HDAC9-213ENST00000433709 ZNF652Q9Y2D9 606 aa7.85□□□□□ -1.15
HDAC9-213ENST00000433709 PCDHB4Q9Y5E5 795 aa7.85□□□□□ -1.15
HDAC9-213ENST00000433709 NEXMIFQ5QGS0 1516 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 ROBO1Q9Y6N7 1651 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 TCRBV5S2A0A599 114 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 TCRBV16S1A1N1A0A5B0 115 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 NPIPB6E9PJ23 425 aa7.84□□□□□ -1.15
HDAC9-213ENST00000433709 KRIT1O00522 736 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms