RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PTH1RQ03431 593 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SUPT20HL1Q3ZLR7 823 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SPDYAQ5MJ70 313 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF746Q6NUN9 644 aaPredicted RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TRMT10CQ7L0Y3 403 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 USHBP1Q8N6Y0 703 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZDHHC15Q96MV8 337 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SEC62Q99442 399 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC113Q9H0I3 377 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 RIOX1Q9H6W3 641 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 PICK1Q9NRD5 415 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 CITO14578 2027 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 CYP3A7-CYP3A51PA0A087WV96 503 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 NDUFA10O95299 355 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 CYP3A7P24462 503 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 PRKCIP41743 596 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TNFAIP2Q03169 654 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 GRM1Q13255 1194 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 NAB1Q13506 487 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 NTRK3Q16288 839 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 IGDCC4Q8TDY8 1250 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 COG1Q8WTW3 980 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 VCXQ9H320 206 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TXLNGQ9NUQ3 528 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF215Q9UL58 517 aaPredicted RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SMG5Q9UPR3 1016 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 CACNA1SQ13698 1873 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 MED7O43513 233 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 TCEAL1Q15170 157 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 HYIQ5T013 277 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 MTMR14Q8NCE2 650 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 SYMPKQ92797 1274 aaKnown RBP4.09□□□□□ -1.75
SHPRH-205ENST00000433355 C2orf40Q9H1Z8 148 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 RAB21Q9UL25 225 aa4.09□□□□□ -1.75
SHPRH-205ENST00000433355 ARHGEF35A5YM69 484 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 ERCC3P19447 782 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 NSFP46459 744 aaKnown RBP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 CAMK4Q16566 473 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF572Q7Z3I7 529 aaPredicted RBP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 CHCHD4Q8N4Q1 142 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 SNX29Q8TEQ0 813 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 CEP95Q96GE4 821 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 RIOK1Q9BRS2 568 aaKnown RBP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 GTF3C4Q9UKN8 822 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 SORCS3Q9UPU3 1222 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 VPS9D1Q9Y2B5 631 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 EFR3BQ9Y2G0 817 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 PLSCR1O15162 318 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 RASA1P20936 1047 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 TSHZ3Q63HK5 1081 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 ZBTB8OSQ8IWT0 167 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 SENP7Q9BQF6 1050 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 AMFRQ9UKV5 643 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 ZBTB1Q9Y2K1 713 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 UBR3Q6ZT12 1888 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 POLR2DO15514 142 aaKnown RBP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 PSTPIP1O43586 416 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 STAMBPO95630 424 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 SNHG28P0DPA3 235 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 MRPS25P82663 173 aaKnown RBP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 DPYDQ12882 1025 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 PTGDRQ13258 359 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 ACAP1Q15027 740 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 PROSER3Q2NL68 480 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 Q4G0T1 1027 aa4.09□□□□□ -1.76
SHPRH-205ENST00000433355 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 ZNF589Q86UQ0 364 aaPredicted RBP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.09□□□□□ -1.76
SHPRH-205ENST00000433355 UBAP1LF5GYI3 381 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TRAF5O00463 557 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ABLIM1O14639 778 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TAF1P21675 1872 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 DRG2P55039 364 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PPP2R5CQ13362 524 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PTPAQ15257 358 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 JARID2Q92833 1246 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 OSBP2Q969R2 916 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 SCLT1Q96NL6 688 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 MAGEB2O15479 319 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TMOD1P28289 359 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PSMC2P35998 433 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ZAP70P43403 619 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 STK3Q13188 491 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TCP11X2Q5H9J9 407 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CENPPQ6IPU0 288 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 BANK1Q8NDB2 785 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 GFM2Q969S9 779 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 TEKT3Q9BXF9 490 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 V9GY48 417 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 SMCO2A6NFE2 343 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 NMT2O60551 498 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 CTNND1O60716 968 aaKnown RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 NR1I2O75469 434 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 MFAP3P55082 362 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 COPS2P61201 443 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 KLHL30Q0D2K2 578 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 ABHD10Q9NUJ1 306 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 PALM3A6NDB9 673 aaPredicted RBP4.08□□□□□ -1.76
SHPRH-205ENST00000433355 GSG1L2A8MUP6 293 aa4.08□□□□□ -1.76
SHPRH-205ENST00000433355 C6orf229H3BNL8 230 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms