RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 COASYQ13057 564 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 PPFIA1Q13136 1202 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 QRICH1Q2TAL8 776 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 EMBQ6PCB8 327 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 ZNF713Q8N859 430 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-206ENST00000433118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMPD4-206ENST00000433118 LUC7LQ9NQ29 371 aaKnown RBP11.6□□□□□ -0.55
SMPD4-206ENST00000433118 PNMA6FA0A0J9YX94 578 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 GOLGA8KD6RF30 607 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 IRAK1P51617 712 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 CXCL9Q07325 125 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 ASTE1Q2TB18 679 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 HGSNATQ68CP4 663 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 TTC19Q6DKK2 380 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 NELFCDQ8IXH7 590 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 RNF10Q8N5U6 811 aaKnown RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 LSM14BQ9BX40 385 aaKnown RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 EHD4Q9H223 541 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 BMP2KQ9NSY1 1161 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 PANK4Q9NVE7 773 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 CEP72Q9P209 647 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 ZNF70Q9UC06 446 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 DDX25Q9UHL0 483 aaKnown RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 PCDHA1Q9Y5I3 950 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 COL4A5P29400 1685 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 PCNTO95613 3336 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 SHOX2O60902 331 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 FTCDO95954 541 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 NDUFB10O96000 172 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 EPS15P42566 896 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 HDLBPQ00341 1268 aaKnown RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 RAPGEF1Q13905 1077 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 FAM26FQ5R3K3 315 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 TSEN2Q8NCE0 465 aaKnown RBP11.59□□□□□ -0.55
SMPD4-206ENST00000433118 PIM2Q9P1W9 311 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 TSKSQ9UJT2 592 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 PLIN4Q96Q06 1357 aa11.59□□□□□ -0.55
SMPD4-206ENST00000433118 ZBTB5O15062 677 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 PALMO75781 387 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 CCT5P48643 541 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 CORO7P57737 925 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 CDC37Q16543 378 aaPredicted RBP11.58□□□□□ -0.55
SMPD4-206ENST00000433118 ECM1Q16610 540 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 IFT81Q8WYA0 676 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 EDEM3Q9BZQ6 932 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 NUCKS1Q9H1E3 243 aaKnown RBP11.58□□□□□ -0.55
SMPD4-206ENST00000433118 PSTPIP2Q9H939 334 aa11.58□□□□□ -0.55
SMPD4-206ENST00000433118 ESYT3A0FGR9 886 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 SERPING1P05155 500 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 GNGT1P63211 74 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 APBA1Q02410 837 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-206ENST00000433118 EHHADHQ08426 723 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 TMEM119Q4V9L6 283 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 GPATCH4Q5T3I0 446 aaKnown RBP11.58□□□□□ -0.56
SMPD4-206ENST00000433118 IFT20Q8IY31 132 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 BCAS4Q8TDM0 211 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 HDAC9Q9UKV0 1011 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.58□□□□□ -0.56
SMPD4-206ENST00000433118 GJA3Q9Y6H8 435 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 EDIL3O43854 480 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
SMPD4-206ENST00000433118 TMEM179Q6ZVK1 233 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 GLIS2Q9BZE0 524 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-206ENST00000433118 ZHX3Q9H4I2 956 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 PCDHA12Q9UN75 941 aa11.58□□□□□ -0.56
SMPD4-206ENST00000433118 PACSIN2Q9UNF0 486 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-206ENST00000433118 TLR2O60603 784 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 HEXIM1O94992 359 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 VIL1P09327 827 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 GUCY2DQ02846 1103 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 TTC31Q49AM3 519 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KIAA1755Q5JYT7 1200 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ALS2CLQ60I27 953 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 TATDN1Q6P1N9 297 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 GBP6Q6ZN66 633 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ARL8AQ96BM9 186 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 DNAJC19Q96DA6 116 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 MRIQ9BWK5 157 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 EPB41L5Q9HCM4 733 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ZNRF3Q9ULT6 936 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 NFU1Q9UMS0 254 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 C10orf71Q711Q0 1435 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ZSCAN5CA6NGD5 496 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 E9PMD0 336 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 EBAG9O00559 213 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 NOL4O94818 638 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 GLI1P08151 1106 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KLRC1P26715 233 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 HOXA13P31271 388 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 FKBP1AP62942 108 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KIAA0753Q2KHM9 967 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 GLE1Q53GS7 698 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 DALRD3Q5D0E6 543 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KCTD16Q68DU8 428 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 FAM133AQ8N9E0 248 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 PPM1EQ8WY54 764 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 JDP2Q8WYK2 163 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms