RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 PXMP2Q9NR77 195 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 TMOD4Q9NZQ9 345 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 RASSF10A6NK89 507 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 DYNC1I1O14576 645 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 KIF20AO95235 890 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 MYCLP12524 364 aaPredicted RBP21.66■■□□□ 1.06
VRK2-205ENST00000432057 ERCC3P19447 782 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 FKBP3Q00688 224 aaKnown RBP21.66■■□□□ 1.06
VRK2-205ENST00000432057 FKBP15Q5T1M5 1219 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 CATSPERGQ6ZRH7 1159 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 ERGIC2Q96RQ1 377 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 RMDN3Q96TC7 470 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 TTYH3Q9C0H2 523 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 ZNF214Q9UL59 606 aaPredicted RBP21.66■■□□□ 1.06
VRK2-205ENST00000432057 CAPN11Q9UMQ6 739 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 ADAMTS5Q9UNA0 930 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 SNCAIPQ9Y6H5 919 aa21.66■■□□□ 1.06
VRK2-205ENST00000432057 DHX15O43143 795 aaKnown RBP21.65■■□□□ 1.06
VRK2-205ENST00000432057 MYBP10242 640 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 YBX3P16989 372 aaKnown RBP eCLIP21.65■■□□□ 1.066e-6■□□□□ 10.9
VRK2-205ENST00000432057 MUTP22033 750 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 MTMR1Q13613 665 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 BAATQ14032 418 aaPredicted RBP21.65■■□□□ 1.06
VRK2-205ENST00000432057 VGLL4Q14135 290 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 COG2Q14746 738 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 TRIM65Q6PJ69 517 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 EPM2AIP1Q7L775 607 aaPredicted RBP21.65■■□□□ 1.06
VRK2-205ENST00000432057 MIER3Q7Z3K6 550 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 TSC1Q92574 1164 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 PCMTD1Q96MG8 357 aaPredicted RBP21.65■■□□□ 1.06
VRK2-205ENST00000432057 PDCD2LQ9BRP1 358 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 NDST4Q9H3R1 872 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 COL4A3BPQ9Y5P4 624 aa21.65■■□□□ 1.06
VRK2-205ENST00000432057 OAZ1P54368 228 aa21.64■■□□□ 1.06
VRK2-205ENST00000432057 TMEM132BQ14DG7 1078 aa21.64■■□□□ 1.06
VRK2-205ENST00000432057 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.64■■□□□ 1.06
VRK2-205ENST00000432057 C1orf186Q6ZWK4 172 aa21.64■■□□□ 1.06
VRK2-205ENST00000432057 TMTC1Q8IUR5 882 aa21.64■■□□□ 1.06
VRK2-205ENST00000432057 NACC1Q96RE7 527 aa21.64■■□□□ 1.06
VRK2-205ENST00000432057 MRPL44Q9H9J2 332 aaKnown RBP21.64■■□□□ 1.06
VRK2-205ENST00000432057 LUC7L2Q9Y383 392 aaKnown RBP21.64■■□□□ 1.06
VRK2-205ENST00000432057 ADGRG1Q9Y653 693 aa21.64■■□□□ 1.06
VRK2-205ENST00000432057 CCDC175P0C221 793 aa21.64■■□□□ 1.05
VRK2-205ENST00000432057 ETF1P62495 437 aaKnown RBP21.64■■□□□ 1.05
VRK2-205ENST00000432057 CCDC40Q4G0X9 1142 aa21.64■■□□□ 1.05
VRK2-205ENST00000432057 ARHGEF16Q5VV41 709 aa21.64■■□□□ 1.05
VRK2-205ENST00000432057 CYP26C1Q6V0L0 522 aa21.64■■□□□ 1.05
VRK2-205ENST00000432057 CEP63Q96MT8 703 aa21.64■■□□□ 1.05
VRK2-205ENST00000432057 DNAJC7Q99615 494 aa21.64■■□□□ 1.05
VRK2-205ENST00000432057 GOLGA6L9A6NEM1 432 aa21.63■■□□□ 1.05
VRK2-205ENST00000432057 TRIM21P19474 475 aaKnown RBP21.63■■□□□ 1.05
VRK2-205ENST00000432057 HOXD13P35453 343 aa21.63■■□□□ 1.05
VRK2-205ENST00000432057 NEK9Q8TD19 979 aa21.63■■□□□ 1.05
VRK2-205ENST00000432057 DCPSQ96C86 337 aaKnown RBP21.63■■□□□ 1.05
VRK2-205ENST00000432057 NUP58Q9BVL2 599 aa21.63■■□□□ 1.05
VRK2-205ENST00000432057 ARID2Q68CP9 1835 aa21.63■■□□□ 1.05
VRK2-205ENST00000432057 PRPF6O94906 941 aaKnown RBP21.62■■□□□ 1.05
VRK2-205ENST00000432057 FAM13AO94988 1023 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 ZC3H3Q8IXZ2 948 aaKnown RBP21.62■■□□□ 1.05
VRK2-205ENST00000432057 OR8K1Q8NGG5 319 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 AGPAT5Q9NUQ2 364 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 SIK3Q9Y2K2 1263 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 SPDYE16A6NNV3 312 aaPredicted RBP21.62■■□□□ 1.05
VRK2-205ENST00000432057 SFI1A8K8P3 1242 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 TUBB4AP04350 444 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 GAP43P17677 238 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 MAP3K9P80192 1104 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 SH3D19Q5HYK7 790 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 C9orf131Q5VYM1 1079 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 PPP4R3CPQ6ZMV5 832 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 ACRBPQ8NEB7 543 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 CNKSR2Q8WXI2 1034 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 CHP1Q99653 195 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 DNAI1Q9UI46 699 aa21.62■■□□□ 1.05
VRK2-205ENST00000432057 PHLPP2Q6ZVD8 1323 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 A0A0U1RQJ8 604 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 GCNT3O95395 438 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 EDRF1Q3B7T1 1238 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 RETREG2Q8NC44 543 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 ATRIPQ8WXE1 791 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 TEX13BQ9BXU2 312 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 OLFML3Q9NRN5 406 aa21.61■■□□□ 1.05
VRK2-205ENST00000432057 TESPA1A2RU30 521 aaPredicted RBP21.6■■□□□ 1.05
VRK2-205ENST00000432057 FANCGO15287 622 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 PLS1Q14651 629 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 KNOP1Q1ED39 458 aaKnown RBP21.6■■□□□ 1.05
VRK2-205ENST00000432057 BMT2Q1RMZ1 405 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 SAMM50Q9Y512 469 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 ARHGEF35A5YM69 484 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 ATP2A1O14983 1001 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 ATP9AO75110 1047 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 CCND2P30279 289 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 ADAM9Q13443 819 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 FIGNQ5HY92 759 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 TREML2Q5T2D2 321 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 WDR59Q6PJI9 974 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 MYCT1Q8N699 235 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 TBC1D22BQ9NU19 505 aa21.6■■□□□ 1.05
VRK2-205ENST00000432057 TRAF3IP3Q9Y228 551 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms