RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 PLPPR4Q7Z2D5 763 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 MIER3Q7Z3K6 550 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 SMARCAD1Q9H4L7 1026 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.19
CSTF3-202ENST00000431742 BMP15O95972 392 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 HOXC8P31273 242 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 SLC26A2P50443 739 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 STAT5BP51692 787 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 RTP1P59025 263 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 PTPN11Q06124 597 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 PTPAQ15257 358 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 SF3A1Q15459 793 aaKnown RBP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 FOXD4L5Q5VV16 416 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 ANKRD33Q7Z3H0 272 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 FOXD4L4Q8WXT5 416 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 GLG1Q92896 1179 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 HTATIP2Q9BUP3 242 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 FTOQ9C0B1 505 aaKnown RBP eCLIP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 AZI2Q9H6S1 392 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 ZNF302Q9NR11 478 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 SAMM50Q9Y512 469 aa16.2■□□□□ 0.18
CSTF3-202ENST00000431742 MAFBQ9Y5Q3 323 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 MORC2Q9Y6X9 1032 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-202ENST00000431742 MROH7Q68CQ1 1323 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 EVPLQ92817 2033 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 POTEMA6NI47 508 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 EPHA7Q15375 998 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 IL17AQ16552 155 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 UGCGQ16739 394 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 TRIM60Q495X7 471 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
CSTF3-202ENST00000431742 SWSAP1Q6NVH7 229 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 FAM126BQ8IXS8 530 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 IGSF22Q8N9C0 903 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 VTI1AQ96AJ9 217 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 USP28Q96RU2 1077 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 GABBR1Q9UBS5 961 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 CLIC4Q9Y696 253 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 SIP14410 1827 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 CEP290O15078 2479 aa16.19■□□□□ 0.18
CSTF3-202ENST00000431742 BACH1O14867 736 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 ZNF862O60290 1169 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 ATP4AP20648 1035 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 NASPP49321 788 aaPredicted RBP16.18■□□□□ 0.18
CSTF3-202ENST00000431742 PLCB4Q15147 1175 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 NCAPH2Q6IBW4 605 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 PDXDC2PQ6P474 469 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 PPP1R13LQ8WUF5 828 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 TOX2Q96NM4 488 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 HDAC6Q9UBN7 1215 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 GTF2IRD1Q9UHL9 959 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 CEP131Q9UPN4 1083 aa16.18■□□□□ 0.18
CSTF3-202ENST00000431742 CD4P01730 458 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 SMIM10L2AP0DMW4 78 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 SMIM10L2BP0DMW5 78 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 MARK3P27448 753 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 TECP42680 631 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 TLE2Q04725 743 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 HIC1Q14526 733 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 C7orf31Q8N865 590 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 ATP8B4Q8TF62 1192 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 ATP6V0A1Q93050 837 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 ZNF396Q96N95 335 aaPredicted RBP16.17■□□□□ 0.18
CSTF3-202ENST00000431742 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 HSD17B14Q9BPX1 270 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 ATP11BQ9Y2G3 1177 aa16.17■□□□□ 0.18
CSTF3-202ENST00000431742 B4GALT4O60513 344 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 PQBP1O60828 265 aaKnown RBP16.16■□□□□ 0.18
CSTF3-202ENST00000431742 STBD1O95210 358 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 P4HBP07237 508 aaKnown RBP16.16■□□□□ 0.18
CSTF3-202ENST00000431742 CHMP4BP1P59074 171 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 ADAM17P78536 824 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 NUCB2P80303 420 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 PRKCEQ02156 737 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 PDIA5Q14554 519 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 FAM47CQ5HY64 1035 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 GDF6Q6KF10 455 aaPredicted RBP16.16■□□□□ 0.18
CSTF3-202ENST00000431742 DTHD1Q6ZMT9 781 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 BANK1Q8NDB2 785 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 NEK9Q8TD19 979 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 LMBR1Q8WVP7 490 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 FAM167AQ96KS9 214 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 EIF2AK1Q9BQI3 630 aaKnown RBP16.16■□□□□ 0.18
CSTF3-202ENST00000431742 LXNQ9BS40 222 aa16.16■□□□□ 0.18
CSTF3-202ENST00000431742 TRMT13Q9NUP7 481 aaKnown RBP16.16■□□□□ 0.18
CSTF3-202ENST00000431742 WRAP73Q9P2S5 460 aaPredicted RBP16.16■□□□□ 0.18
CSTF3-202ENST00000431742 CIZ1Q9ULV3 898 aaPredicted RBP16.16■□□□□ 0.18
CSTF3-202ENST00000431742 COL1A2P08123 1366 aa16.15■□□□□ 0.18
CSTF3-202ENST00000431742 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
CSTF3-202ENST00000431742 ZBTB42B2RXF5 422 aa16.15■□□□□ 0.18
CSTF3-202ENST00000431742 SLITRK3O94933 977 aa16.15■□□□□ 0.18
CSTF3-202ENST00000431742 LYPLA2O95372 231 aa16.15■□□□□ 0.18
CSTF3-202ENST00000431742 OATP04181 439 aa16.15■□□□□ 0.18
CSTF3-202ENST00000431742 QARSP47897 775 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms