RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 IL17RAQ96F46 866 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 SEC62Q99442 399 aaKnown RBP9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 SPSB2Q99619 263 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 TMEM47Q9BQJ4 181 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 MAF1Q9H063 256 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 IGFLR1Q9H665 355 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 KAT14Q9H8E8 782 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 MLXIPQ9HAP2 919 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 IL17RBQ9NRM6 502 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 CD207Q9UJ71 328 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 ZNF215Q9UL58 517 aaPredicted RBP9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 KIAA1217Q5T5P2 1943 aa9.13□□□□□ -0.95
ECHDC1-207ENST00000430841 MYH6P13533 1939 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 SORBS3O60504 671 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 CAND2O75155 1236 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 EIF3JO75822 258 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 CFBP00751 764 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 SRGAP2BP0DMP2 458 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 HSPD1P10809 573 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 MYCLP12524 364 aaPredicted RBP9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 IRS1P35568 1242 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 MFAP1P55081 439 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 MFSD6Q6ZSS7 791 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 RSPH3Q86UC2 560 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 IQCA1Q86XH1 822 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 RGS22Q8NE09 1264 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 ESR2Q92731 530 aa9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 FCF1Q9Y324 198 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-207ENST00000430841 TMEM221A6NGB7 291 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 M0R296 226 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 KDM4AO75164 1064 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 GGPS1O95749 300 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 OATP04181 439 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 RB1P06400 928 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 PCP11498 1178 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 HTRA4P83105 476 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 FOXK2Q01167 660 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 TRAF1Q13077 416 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 BTG3Q14201 252 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 SMAD2Q15796 467 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 GNPTABQ3T906 1256 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 HERC4Q5GLZ8 1057 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 CCDC62Q6P9F0 684 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 RNF135Q8IUD6 432 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 KAT2BQ92831 832 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 TTC14Q96N46 770 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 ANAPC4Q9UJX5 808 aa9.11□□□□□ -0.95
ECHDC1-207ENST00000430841 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 MYH7BA7E2Y1 1941 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 FSD2A1L4K1 749 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 MBTPS2O43462 519 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 NR3C2P08235 984 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 GOLGA8HP0CJ92 632 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 MX1P20591 662 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 CCND2P30279 289 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 SUZ12Q15022 739 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 ASPRV1Q53RT3 343 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 PLEKHG4Q58EX7 1191 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 SPOUT1Q5T280 376 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 SERINC5Q86VE9 423 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 SYTL5Q8TDW5 730 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 EDAQ92838 391 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 ATOH1Q92858 354 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 TOP1MTQ969P6 601 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 CCDC97Q96F63 343 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 TAAR1Q96RJ0 339 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 PXMP2Q9NR77 195 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 TCP11L1Q9NUJ3 509 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 ZDBF2Q9HCK1 2354 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 COL4A6Q14031 1691 aa9.1□□□□□ -0.95
ECHDC1-207ENST00000430841 ZNF318Q5VUA4 2279 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 H3BRB1 525 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 M0QZ92 97 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 PARP1P09874 1014 aaKnown RBP9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 SMIM10L2AP0DMW4 78 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 SMIM10L2BP0DMW5 78 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 HAND2P61296 217 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 ZNF200P98182 395 aaPredicted RBP9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 FBXL6Q8N531 539 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 PNMA1Q8ND90 353 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 UBAC1Q9BSL1 405 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 AMNQ9BXJ7 453 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 UBA5Q9GZZ9 404 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 TUT1Q9H6E5 874 aaKnown RBP9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 VAT1LQ9HCJ6 419 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 PRDM9Q9NQV7 894 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 HELLSQ9NRZ9 838 aa9.09□□□□□ -0.95
ECHDC1-207ENST00000430841 J3QL48 77 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 HAS3O00219 553 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 MMP1P03956 469 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 TGFB3P10600 412 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 IBSPP21815 317 aaPredicted RBP9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 BMPR1AP36894 532 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms