RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 LBRQ14739 615 aaKnown RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 CASP8Q14790 479 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 PODXLO00592 558 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 PRPSAP2O60256 369 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 XKR9Q5GH70 373 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 RBM46Q8TBY0 533 aaKnown RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 THOC1Q96FV9 657 aaKnown RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 SOS2Q07890 1332 aaPredicted RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 ZBED1O96006 694 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 RTL3Q8N8U3 475 aaKnown RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 ARHGAP17Q68EM7 881 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 TTC8Q8TAM2 541 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 BATF3Q9NR55 127 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 LRRIQ4A6NIV6 560 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 CDC25BP30305 580 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 NSMFQ6X4W1 530 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 ABI1Q8IZP0 508 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 ECT2Q9H8V3 914 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 VPS54Q9P1Q0 977 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 MLH1P40692 756 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 KIF23Q02241 960 aaPredicted RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 KLC1Q07866 573 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 NME9Q86XW9 330 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 GINM1Q9NU53 330 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 H2AFY2Q9P0M6 372 aaPredicted RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 AURKCQ9UQB9 309 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 CPA1P15085 419 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 NDUFA5Q16718 116 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 ARL13BQ3SXY8 428 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 DNAJC24Q6P3W2 148 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 TTLL7Q6ZT98 887 aa17.62■□□□□ 0.41
RIF1-204ENST00000430328 LARP4BQ92615 738 aaKnown RBP17.62■□□□□ 0.41
RIF1-204ENST00000430328 TESPA1A2RU30 521 aaPredicted RBP17.61■□□□□ 0.41
RIF1-204ENST00000430328 CNPY4Q8N129 248 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 NCAPD3P42695 1498 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 INPP5AQ14642 412 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 MAPRE2Q15555 327 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 RETREG2Q8NC44 543 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 FANCLQ9NW38 375 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 LAMC2Q13753 1193 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 C16orf62Q7Z3J2 963 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 DEPDC7Q96QD5 511 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 GPBP1L1Q9HC44 474 aaPredicted RBP17.61■□□□□ 0.41
RIF1-204ENST00000430328 FAM32AQ9Y421 112 aaKnown RBP17.61■□□□□ 0.41
RIF1-204ENST00000430328 ATP8B3O60423 1300 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
RIF1-204ENST00000430328 INPP5DQ92835 1189 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 CNOT6LQ96LI5 555 aaKnown RBP17.61■□□□□ 0.41
RIF1-204ENST00000430328 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 LOC102724159A0A0B4J2E5 919 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 FAM83GA6ND36 823 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 KRT38O76015 456 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 PWP2Q15269 919 aaKnown RBP17.61■□□□□ 0.41
RIF1-204ENST00000430328 BEGAINQ9BUH8 593 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 RNPEPQ9H4A4 650 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 TJP3O95049 919 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 STX3Q13277 289 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 ANKRD13CQ8N6S4 541 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 BBS2Q9BXC9 721 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 EMILIN1Q9Y6C2 1016 aa17.61■□□□□ 0.41
RIF1-204ENST00000430328 PDCLQ13371 301 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 MXD4Q14582 209 aaPredicted RBP17.6■□□□□ 0.41
RIF1-204ENST00000430328 BBS9Q3SYG4 887 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 KRT40Q6A162 431 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 DMAP1Q9NPF5 467 aaPredicted RBP17.6■□□□□ 0.41
RIF1-204ENST00000430328 KCNJ14Q9UNX9 436 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 PI4K2BG5E9Z4 385 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 EMBQ6PCB8 327 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 SLC7A5Q01650 507 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 TRIM16LQ309B1 348 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 TEX2Q8IWB9 1127 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 GANCQ8TET4 914 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 APPBP2Q92624 585 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 TUBGCP2Q9BSJ2 902 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 CYP4F11Q9HBI6 524 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 GPAA1O43292 621 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 KLHL18O94889 574 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 DLGAP3O95886 979 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 FAM173BQ6P4H8 233 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 TMC5Q6UXY8 1006 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 KRT26Q7Z3Y9 468 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 EXOC8Q8IYI6 725 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 RNF139Q8WU17 664 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 LRRC4Q9HBW1 653 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 PIK3R2O00459 728 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 CAPZA2P47755 286 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 ACTN3Q08043 901 aaPredicted RBP17.6■□□□□ 0.41
RIF1-204ENST00000430328 COG1Q8WTW3 980 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 ATP8A2Q9NTI2 1148 aa17.6■□□□□ 0.41
RIF1-204ENST00000430328 CCDC22O60826 627 aa17.59■□□□□ 0.41
RIF1-204ENST00000430328 ADCK5Q3MIX3 580 aa17.59■□□□□ 0.41
RIF1-204ENST00000430328 ARMT1Q9H993 441 aa17.59■□□□□ 0.41
RIF1-204ENST00000430328 HAUS5O94927 633 aa17.59■□□□□ 0.41
RIF1-204ENST00000430328 PFKFB1P16118 471 aa17.59■□□□□ 0.41
RIF1-204ENST00000430328 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
RIF1-204ENST00000430328 CLEC4FQ8N1N0 589 aa17.59■□□□□ 0.41
RIF1-204ENST00000430328 FSD1LQ9BXM9 530 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms